RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W MET13P53128 600 aa2.89□□□□□ -1.95
UBP1YDL122W TOM1Q03280 3268 aa2.88□□□□□ -1.95
UBP1YDL122W PDC1P06169 563 aaKnown RBP2.88□□□□□ -1.95
UBP1YDL122W SWI6P09959 803 aa2.88□□□□□ -1.95
UBP1YDL122W ARG8P18544 423 aa2.88□□□□□ -1.95
UBP1YDL122W RPS7AP26786 190 aaKnown RBP2.88□□□□□ -1.95
UBP1YDL122W PDR3P33200 976 aa2.88□□□□□ -1.95
UBP1YDL122W GPT2P36148 743 aa2.88□□□□□ -1.95
UBP1YDL122W RPA14P50106 137 aa2.88□□□□□ -1.95
UBP1YDL122W ALE1Q08548 619 aa2.88□□□□□ -1.95
UBP1YDL122W MET32Q12041 191 aa2.88□□□□□ -1.95
UBP1YDL122W PUS1Q12211 544 aaKnown RBP2.88□□□□□ -1.95
UBP1YDL122W URK1P27515 501 aa2.88□□□□□ -1.95
UBP1YDL122W POT1P27796 417 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
UBP1YDL122W KTR2P33550 425 aa2.88□□□□□ -1.95
UBP1YDL122W HAL5P38970 855 aaKnown RBP2.88□□□□□ -1.95
UBP1YDL122W GPB2P39717 880 aa2.88□□□□□ -1.95
UBP1YDL122W YGR035CP53222 116 aa2.88□□□□□ -1.95
UBP1YDL122W ENV11P53246 860 aa2.88□□□□□ -1.95
UBP1YDL122W RPT4P53549 437 aaKnown RBP2.88□□□□□ -1.95
UBP1YDL122W YPR097WQ06839 1073 aa2.88□□□□□ -1.95
UBP1YDL122W PMA1P05030 918 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W PPZ1P26570 692 aa2.87□□□□□ -1.95
UBP1YDL122W ARP1P38696 384 aa2.87□□□□□ -1.95
UBP1YDL122W BIM1P40013 344 aa2.87□□□□□ -1.95
UBP1YDL122W FAA4P47912 694 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W HCR1Q05775 265 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W ALR1Q08269 859 aa2.87□□□□□ -1.95
UBP1YDL122W UGA3P26370 528 aa2.87□□□□□ -1.95
UBP1YDL122W CSN12P47130 423 aa2.87□□□□□ -1.95
UBP1YDL122W KIP3P53086 805 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W HST3P53687 447 aa2.87□□□□□ -1.95
UBP1YDL122W ORC1P54784 914 aaPredicted RBP2.87□□□□□ -1.95
UBP1YDL122W SYH1Q02875 849 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W GYL1Q04322 720 aa2.87□□□□□ -1.95
UBP1YDL122W WRS1Q12109 432 aaKnown RBP2.87□□□□□ -1.95
UBP1YDL122W PUF4P25339 888 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95 RIP-Chip
UBP1YDL122W TOM71P38825 639 aaKnown RBP2.86□□□□□ -1.95
UBP1YDL122W NOC2P39744 710 aaKnown RBP2.86□□□□□ -1.95
UBP1YDL122W FMP10P40098 244 aa2.86□□□□□ -1.95
UBP1YDL122W YTA12P40341 825 aa2.86□□□□□ -1.95
UBP1YDL122W JJJ2P46997 583 aa2.86□□□□□ -1.95
UBP1YDL122W PTK2P47116 818 aaKnown RBP2.86□□□□□ -1.95
UBP1YDL122W CAF120P53836 1060 aa2.86□□□□□ -1.95
UBP1YDL122W TBF1Q02457 562 aa2.86□□□□□ -1.95
UBP1YDL122W SPO71Q03868 1245 aa2.86□□□□□ -1.95
UBP1YDL122W MMR1Q06324 491 aa2.86□□□□□ -1.95
UBP1YDL122W MMP1Q12372 583 aa2.86□□□□□ -1.95
UBP1YDL122W RTP1Q12751 981 aa2.86□□□□□ -1.95
UBP1YDL122W SWI1P09547 1314 aa2.86□□□□□ -1.95
UBP1YDL122W ECM29P38737 1868 aa2.86□□□□□ -1.95
UBP1YDL122W ATG32P40458 529 aa2.85□□□□□ -1.95
UBP1YDL122W RPL34BP40525 121 aaKnown RBP2.85□□□□□ -1.95
UBP1YDL122W SPO74P45819 413 aa2.85□□□□□ -1.95
UBP1YDL122W YJL045WP47052 634 aa2.85□□□□□ -1.95
UBP1YDL122W SNU71P53207 620 aaKnown RBP2.85□□□□□ -1.95
UBP1YDL122W YPR084WQ06821 456 aa2.85□□□□□ -1.95
UBP1YDL122W YDL206WQ12424 762 aa2.85□□□□□ -1.95
UBP1YDL122W GCN1P33892 2672 aaKnown RBP2.85□□□□□ -1.95
UBP1YDL122W TRM1P15565 570 aaKnown RBP2.85□□□□□ -1.95
UBP1YDL122W VMA2P16140 517 aaKnown RBP2.85□□□□□ -1.95
UBP1YDL122W BET2P20133 325 aa2.85□□□□□ -1.95
UBP1YDL122W SLD2P34252 453 aa2.85□□□□□ -1.95
UBP1YDL122W STB5P38699 743 aa2.85□□□□□ -1.95
UBP1YDL122W YER158CP40095 573 aa2.85□□□□□ -1.95
UBP1YDL122W SKP2P42843 763 aa2.85□□□□□ -1.95
UBP1YDL122W PIN2Q12057 282 aa2.85□□□□□ -1.95
UBP1YDL122W LAM4P38800 1345 aa2.85□□□□□ -1.95
UBP1YDL122W CDC19P00549 500 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W SNA3P14359 133 aa2.84□□□□□ -1.95
UBP1YDL122W SCJ1P25303 377 aa2.84□□□□□ -1.95
UBP1YDL122W ADP1P25371 1049 aa2.84□□□□□ -1.95
UBP1YDL122W PUP3P25451 205 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W YUR1P26725 428 aa2.84□□□□□ -1.95
UBP1YDL122W NMD3P38861 518 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W VPS53P47061 822 aa2.84□□□□□ -1.95
UBP1YDL122W INP52P50942 1183 aa2.84□□□□□ -1.95
UBP1YDL122W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
UBP1YDL122W LCD1Q04377 747 aa2.84□□□□□ -1.95
UBP1YDL122W SPL2P38839 148 aa2.84□□□□□ -1.95
UBP1YDL122W ACO2P39533 789 aa2.84□□□□□ -1.95
UBP1YDL122W NUG1P40010 520 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W IOC3P43596 787 aa2.84□□□□□ -1.95
UBP1YDL122W DAK1P54838 584 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W RPL34AP87262 121 aaPredicted RBP2.84□□□□□ -1.95
UBP1YDL122W MLP1Q02455 1875 aaKnown RBP2.84□□□□□ -1.95
UBP1YDL122W MRT4P33201 236 aaKnown RBP2.83□□□□□ -1.96
UBP1YDL122W CIT3P43635 486 aa2.83□□□□□ -1.96
UBP1YDL122W YJR115WP47152 169 aa2.83□□□□□ -1.96
UBP1YDL122W YML053CQ04978 212 aa2.83□□□□□ -1.96
UBP1YDL122W YPR204WQ08995 1032 aa2.83□□□□□ -1.96
UBP1YDL122W SAC3P46674 1301 aa2.83□□□□□ -1.96
UBP1YDL122W SEN1Q00416 2231 aaKnown RBP2.83□□□□□ -1.96
UBP1YDL122W MBR1P23493 339 aa2.83□□□□□ -1.96
UBP1YDL122W APL2P36000 726 aaPredicted RBP2.83□□□□□ -1.96
UBP1YDL122W FMO1P38866 432 aa2.83□□□□□ -1.96
UBP1YDL122W FUN12P39730 1002 aaKnown RBP2.83□□□□□ -1.96
UBP1YDL122W MSH4P40965 878 aaPredicted RBP2.83□□□□□ -1.96
UBP1YDL122W YGR130CP53278 816 aa2.83□□□□□ -1.96
UBP1YDL122W NSE3Q05541 303 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms