RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SHE10P53075 577 aa2.66□□□□□ -1.98
NUP170YBL079W CSM3Q04659 317 aa2.66□□□□□ -1.98
NUP170YBL079W NHA1Q99271 985 aa2.66□□□□□ -1.98
NUP170YBL079W SRP40P32583 406 aaPredicted RBP2.66□□□□□ -1.98
NUP170YBL079W STS1P38637 319 aa2.66□□□□□ -1.98
NUP170YBL079W YAP1801P38856 637 aa2.66□□□□□ -1.98
NUP170YBL079W OYE2Q03558 400 aaKnown RBP2.66□□□□□ -1.98
NUP170YBL079W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
NUP170YBL079W SPH1Q06160 661 aa2.66□□□□□ -1.98
NUP170YBL079W SKG3Q06315 1026 aa2.66□□□□□ -1.98
NUP170YBL079W PIB1Q06651 286 aa2.66□□□□□ -1.98
NUP170YBL079W SUT2Q12286 268 aa2.66□□□□□ -1.98
NUP170YBL079W ATP1P07251 545 aaKnown RBP2.65□□□□□ -1.98
NUP170YBL079W SKG6P32900 734 aaPredicted RBP2.65□□□□□ -1.98
NUP170YBL079W PTC3P34221 468 aaKnown RBP2.65□□□□□ -1.98
NUP170YBL079W YEL025CP39991 1188 aa2.65□□□□□ -1.98
NUP170YBL079W RTC4P53850 401 aa2.65□□□□□ -1.98
NUP170YBL079W SVF1Q05515 481 aa2.65□□□□□ -1.98
NUP170YBL079W UBX5Q06682 500 aa2.65□□□□□ -1.98
NUP170YBL079W SMC5Q08204 1093 aa2.65□□□□□ -1.98
NUP170YBL079W TRP2P00899 507 aaKnown RBP2.65□□□□□ -1.98
NUP170YBL079W YBL036CP38197 257 aa2.65□□□□□ -1.98
NUP170YBL079W YDL073WQ07454 984 aa2.65□□□□□ -1.98
NUP170YBL079W HMG2P12684 1045 aa2.65□□□□□ -1.99
NUP170YBL079W DUR3P33413 735 aa2.65□□□□□ -1.99
NUP170YBL079W INM2Q05533 292 aa2.65□□□□□ -1.99
NUP170YBL079W PIG1Q06216 648 aa2.65□□□□□ -1.99
NUP170YBL079W VIP1Q06685 1146 aaKnown RBP2.65□□□□□ -1.99
NUP170YBL079W KEL1P38853 1164 aaKnown RBP2.65□□□□□ -1.99
NUP170YBL079W CSM2P40465 213 aa2.65□□□□□ -1.99
NUP170YBL079W NOP13P53883 403 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
NUP170YBL079W CUS1Q02554 436 aaPredicted RBP2.65□□□□□ -1.99
NUP170YBL079W NSE5Q03718 556 aa2.65□□□□□ -1.99
NUP170YBL079W YDL129WQ07555 291 aa2.65□□□□□ -1.99
NUP170YBL079W WHI4Q07655 649 aaKnown RBP2.65□□□□□ -1.99
NUP170YBL079W TAF10Q12030 206 aa2.65□□□□□ -1.99
NUP170YBL079W RVB2Q12464 471 aaKnown RBP2.65□□□□□ -1.99
NUP170YBL079W SNF3P10870 884 aa2.64□□□□□ -1.99
NUP170YBL079W PSP2P50109 593 aaKnown RBP2.64□□□□□ -1.99
NUP170YBL079W ENV11P53246 860 aa2.64□□□□□ -1.99
NUP170YBL079W GDE1Q02979 1223 aa2.64□□□□□ -1.99
NUP170YBL079W FCP1Q03254 732 aa2.64□□□□□ -1.99
NUP170YBL079W SPN1Q06505 410 aaPredicted RBP2.64□□□□□ -1.99
NUP170YBL079W CET1O13297 549 aaPredicted RBP2.64□□□□□ -1.99
NUP170YBL079W IMG2P25642 146 aaPredicted RBP2.64□□□□□ -1.99
NUP170YBL079W NOC2P39744 710 aaKnown RBP2.64□□□□□ -1.99
NUP170YBL079W SPO22P40511 975 aa2.64□□□□□ -1.99
NUP170YBL079W BDP1P46678 594 aa2.64□□□□□ -1.99
NUP170YBL079W FOL1P53848 824 aa2.64□□□□□ -1.99
NUP170YBL079W UBP10P53874 792 aaPredicted RBP2.64□□□□□ -1.99
NUP170YBL079W MSC2Q03455 724 aa2.64□□□□□ -1.99
NUP170YBL079W EAF1Q06337 982 aa2.64□□□□□ -1.99
NUP170YBL079W TCP1P12612 559 aaKnown RBP2.64□□□□□ -1.99
NUP170YBL079W TRK1P12685 1235 aa2.64□□□□□ -1.99
NUP170YBL079W POX1P13711 748 aa2.64□□□□□ -1.99
NUP170YBL079W RPL8AP17076 256 aaKnown RBP2.64□□□□□ -1.99
NUP170YBL079W BIO2P32451 375 aa2.64□□□□□ -1.99
NUP170YBL079W STV1P37296 890 aa2.64□□□□□ -1.99
NUP170YBL079W GYP8P43570 497 aa2.64□□□□□ -1.99
NUP170YBL079W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
NUP170YBL079W KEX1P09620 729 aa2.63□□□□□ -1.99
NUP170YBL079W RAD18P10862 487 aa2.63□□□□□ -1.99
NUP170YBL079W SAF1P38352 637 aa2.63□□□□□ -1.99
NUP170YBL079W YBR287WP38355 427 aa2.63□□□□□ -1.99
NUP170YBL079W NMD3P38861 518 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W NAF1P53919 492 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W IMP4P53941 290 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W RTT109Q07794 436 aa2.63□□□□□ -1.99
NUP170YBL079W PGK1P00560 416 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W MCR1P36060 302 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W RIM4P38741 713 aa2.63□□□□□ -1.99
NUP170YBL079W SPL2P38839 148 aa2.63□□□□□ -1.99
NUP170YBL079W CRG1P38892 291 aaRIP-Chip data2.63□□□□□ -1.99 RIP-Chip
NUP170YBL079W ESL1P40456 1118 aa2.63□□□□□ -1.99
NUP170YBL079W YGL242CP53066 181 aa2.63□□□□□ -1.99
NUP170YBL079W SEC5P89102 971 aa2.63□□□□□ -1.99
NUP170YBL079W MSS51P32335 436 aa2.63□□□□□ -1.99
NUP170YBL079W DPH2P32461 534 aa2.63□□□□□ -1.99
NUP170YBL079W CCT3P39077 534 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W MOB1P40484 314 aa2.63□□□□□ -1.99
NUP170YBL079W SKP2P42843 763 aa2.63□□□□□ -1.99
NUP170YBL079W RPL8BP29453 256 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W DID4P36108 232 aa2.63□□□□□ -1.99
NUP170YBL079W TVP38P36164 337 aa2.63□□□□□ -1.99
NUP170YBL079W ROG3P43602 733 aa2.63□□□□□ -1.99
NUP170YBL079W YNL134CP53912 376 aaKnown RBP2.63□□□□□ -1.99
NUP170YBL079W PEX29Q03370 554 aa2.63□□□□□ -1.99
NUP170YBL079W YML083CQ04526 418 aa2.63□□□□□ -1.99
NUP170YBL079W YDR344CQ05510 147 aa2.63□□□□□ -1.99
NUP170YBL079W PHM6Q05637 104 aa2.63□□□□□ -1.99
NUP170YBL079W OSH2Q12451 1283 aa2.63□□□□□ -1.99
NUP170YBL079W FUS1P11710 512 aa2.62□□□□□ -1.99
NUP170YBL079W UBC1P21734 215 aaKnown RBP2.62□□□□□ -1.99
NUP170YBL079W RPC53P25441 422 aa2.62□□□□□ -1.99
NUP170YBL079W YHR202WP38887 602 aa2.62□□□□□ -1.99
NUP170YBL079W YJL045WP47052 634 aa2.62□□□□□ -1.99
NUP170YBL079W RPS15Q01855 142 aaKnown RBP2.62□□□□□ -1.99
NUP170YBL079W YPR148CQ06523 435 aa2.62□□□□□ -1.99
NUP170YBL079W DNL4Q08387 944 aaPredicted RBP2.62□□□□□ -1.99
NUP170YBL079W LAP2Q10740 671 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms