RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-222ENST00000641321 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
CASC19-222ENST00000641321 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
CASC19-222ENST00000641321 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
CASC19-222ENST00000641321 GPSM3Q9Y4H4 160 aa10.38□□□□□ -0.75
CASC19-222ENST00000641321 CTSOP43234 321 aaPredicted RBP10.37□□□□□ -0.75
CASC19-222ENST00000641321 ZNF385CQ66K41 422 aaPredicted RBP10.37□□□□□ -0.75
CASC19-222ENST00000641321 SLURP2P0DP57 97 aa10.36□□□□□ -0.75
CASC19-222ENST00000641321 MARSP56192 900 aaKnown RBP10.36□□□□□ -0.75
CASC19-222ENST00000641321 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
CASC19-222ENST00000641321 NR6A1Q15406 480 aa10.36□□□□□ -0.75
CASC19-222ENST00000641321 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
CASC19-222ENST00000641321 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
CASC19-222ENST00000641321 PPP2R2DQ66LE6 453 aa10.36□□□□□ -0.75
CASC19-222ENST00000641321 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
CASC19-222ENST00000641321 AGBL1Q96MI9 1066 aa10.36□□□□□ -0.75
CASC19-222ENST00000641321 INSM2Q96T92 566 aaPredicted RBP10.36□□□□□ -0.75
CASC19-222ENST00000641321 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
CASC19-222ENST00000641321 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.35□□□□□ -0.75
CASC19-222ENST00000641321 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
CASC19-222ENST00000641321 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
CASC19-222ENST00000641321 KIF13AQ9H1H9 1805 aa10.34□□□□□ -0.75
CASC19-222ENST00000641321 ARHGEF15O94989 841 aa10.33□□□□□ -0.76
CASC19-222ENST00000641321 RAB15P59190 212 aa10.33□□□□□ -0.76
CASC19-222ENST00000641321 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
CASC19-222ENST00000641321 ADAM32Q8TC27 787 aa10.33□□□□□ -0.76
CASC19-222ENST00000641321 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
CASC19-222ENST00000641321 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
CASC19-222ENST00000641321 SH3D19Q5HYK7 790 aa10.32□□□□□ -0.76
CASC19-222ENST00000641321 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
CASC19-222ENST00000641321 ZNF395Q9H8N7 513 aaPredicted RBP10.32□□□□□ -0.76
CASC19-222ENST00000641321 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■■■□ 24.7
CASC19-222ENST00000641321 SENP3-EIF4A1A0A087X0R7 540 aa10.31□□□□□ -0.76
CASC19-222ENST00000641321 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
CASC19-222ENST00000641321 PROCA1Q8NCQ7 364 aaPredicted RBP10.31□□□□□ -0.76
CASC19-222ENST00000641321 AP1G2O75843 785 aa10.3□□□□□ -0.76
CASC19-222ENST00000641321 ADH1AP07327 375 aa10.3□□□□□ -0.76
CASC19-222ENST00000641321 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
CASC19-222ENST00000641321 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
CASC19-222ENST00000641321 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
CASC19-222ENST00000641321 LILRA1O75019 489 aa10.29□□□□□ -0.76
CASC19-222ENST00000641321 IRS1P35568 1242 aa10.29□□□□□ -0.76
CASC19-222ENST00000641321 ZNF784Q8NCA9 323 aaPredicted RBP10.29□□□□□ -0.76
CASC19-222ENST00000641321 ENAMQ9NRM1 1142 aa10.29□□□□□ -0.76
CASC19-222ENST00000641321 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
CASC19-222ENST00000641321 GAPVD1Q14C86 1478 aa10.29□□□□□ -0.76
CASC19-222ENST00000641321 IGHA1P01876 353 aa10.28□□□□□ -0.76
CASC19-222ENST00000641321 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
CASC19-222ENST00000641321 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
CASC19-222ENST00000641321 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
CASC19-222ENST00000641321 KDF1Q8NAX2 398 aaPredicted RBP10.28□□□□□ -0.76
CASC19-222ENST00000641321 ESPNB1AK53 854 aa10.27□□□□□ -0.77
CASC19-222ENST00000641321 PTGIRP43119 386 aa10.27□□□□□ -0.77
CASC19-222ENST00000641321 FOXK2Q01167 660 aa10.27□□□□□ -0.77
CASC19-222ENST00000641321 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
CASC19-222ENST00000641321 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
CASC19-222ENST00000641321 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
CASC19-222ENST00000641321 SNAPC4Q5SXM2 1469 aa10.26□□□□□ -0.77
CASC19-222ENST00000641321 ERVH48-1M5A8F1 160 aa10.26□□□□□ -0.77
CASC19-222ENST00000641321 ADAMTS2O95450 1211 aa10.26□□□□□ -0.77
CASC19-222ENST00000641321 SRSF11Q05519 484 aaKnown RBP10.26□□□□□ -0.77
CASC19-222ENST00000641321 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
CASC19-222ENST00000641321 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
CASC19-222ENST00000641321 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
CASC19-222ENST00000641321 GMCL1Q96IK5 515 aa10.24□□□□□ -0.77
CASC19-222ENST00000641321 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
CASC19-222ENST00000641321 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
CASC19-222ENST00000641321 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
CASC19-222ENST00000641321 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
CASC19-222ENST00000641321 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
CASC19-222ENST00000641321 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
CASC19-222ENST00000641321 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
CASC19-222ENST00000641321 CUEDC1Q9NWM3 386 aaPredicted RBP10.22□□□□□ -0.77
CASC19-222ENST00000641321 GAS6Q14393 721 aa10.21□□□□□ -0.77
CASC19-222ENST00000641321 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.77
CASC19-222ENST00000641321 PRICKLE2Q7Z3G6 844 aa10.21□□□□□ -0.77
CASC19-222ENST00000641321 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
CASC19-222ENST00000641321 SYNJ2O15056 1496 aa10.21□□□□□ -0.78
CASC19-222ENST00000641321 ERCC6L2Q5T890 1561 aa10.21□□□□□ -0.78
CASC19-222ENST00000641321 PHF20L1A8MW92 1017 aa10.2□□□□□ -0.78
CASC19-222ENST00000641321 RNF144AP50876 292 aaPredicted RBP10.2□□□□□ -0.78
CASC19-222ENST00000641321 GPBP1L1Q9HC44 474 aaPredicted RBP10.2□□□□□ -0.78
CASC19-222ENST00000641321 CYLDQ9NQC7 956 aa10.2□□□□□ -0.78
CASC19-222ENST00000641321 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
CASC19-222ENST00000641321 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
CASC19-222ENST00000641321 MBIPQ9NS73 344 aa10.19□□□□□ -0.78
CASC19-222ENST00000641321 KDM6BO15054 1643 aa10.18□□□□□ -0.78
CASC19-222ENST00000641321 H7C1W4 665 aa10.18□□□□□ -0.78
CASC19-222ENST00000641321 CELA2BP08218 269 aaPredicted RBP10.18□□□□□ -0.78
CASC19-222ENST00000641321 RIPOR1Q6ZS17 1223 aa10.18□□□□□ -0.78
CASC19-222ENST00000641321 GRIN2BQ13224 1484 aa10.17□□□□□ -0.78
CASC19-222ENST00000641321 MEN1O00255 615 aa10.17□□□□□ -0.78
CASC19-222ENST00000641321 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
CASC19-222ENST00000641321 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CASC19-222ENST00000641321 ESF1Q9H501 851 aaKnown RBP10.17□□□□□ -0.78
CASC19-222ENST00000641321 NSFL1CQ9UNZ2 370 aaKnown RBP10.17□□□□□ -0.78
CASC19-222ENST00000641321 RHOQP17081 205 aa10.16□□□□□ -0.78
CASC19-222ENST00000641321 GPC1P35052 558 aa10.16□□□□□ -0.78
CASC19-222ENST00000641321 SLC27A3Q5K4L6 730 aa10.16□□□□□ -0.78
CASC19-222ENST00000641321 NEDD1Q8NHV4 660 aa10.16□□□□□ -0.78
CASC19-222ENST00000641321 ZNF592Q92610 1267 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms