RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 RSPH1Q8WYR4 309 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 CHD1O14646 1710 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 FGAP02671 866 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 HSD3B2P26439 372 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
PCAT18-201ENST00000579458 MKL1Q969V6 931 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
PCAT18-201ENST00000579458 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
PCAT18-201ENST00000579458 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
PCAT18-201ENST00000579458 KCTD2Q14681 263 aa12.16□□□□□ -0.46
PCAT18-201ENST00000579458 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
PCAT18-201ENST00000579458 PYGBP11216 843 aa12.16□□□□□ -0.46
PCAT18-201ENST00000579458 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
PCAT18-201ENST00000579458 MYCBPQ99417 103 aaPredicted RBP12.16□□□□□ -0.46
PCAT18-201ENST00000579458 CEP126Q9P2H0 1117 aa12.15□□□□□ -0.46
PCAT18-201ENST00000579458 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.47
PCAT18-201ENST00000579458 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.47
PCAT18-201ENST00000579458 SCAMP3O14828 347 aaKnown RBP12.14□□□□□ -0.47
PCAT18-201ENST00000579458 ANKRD23Q86SG2 305 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 VDRP11473 427 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 GNALP38405 381 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 MTA1Q13330 715 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
PCAT18-201ENST00000579458 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.14□□□□□ -0.47
PCAT18-201ENST00000579458 TIMM44O43615 452 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 LMNB1P20700 586 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
PCAT18-201ENST00000579458 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 OSBPL2Q9H1P3 480 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 CAMK2BQ13554 666 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
PCAT18-201ENST00000579458 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
PCAT18-201ENST00000579458 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
PCAT18-201ENST00000579458 AS3MTQ9HBK9 375 aa12.12□□□□□ -0.47
PCAT18-201ENST00000579458 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
PCAT18-201ENST00000579458 GNPATO15228 680 aa12.12□□□□□ -0.47
PCAT18-201ENST00000579458 MRPL58Q14197 206 aaKnown RBP12.12□□□□□ -0.47
PCAT18-201ENST00000579458 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
PCAT18-201ENST00000579458 EID1Q9Y6B2 187 aa12.12□□□□□ -0.47
PCAT18-201ENST00000579458 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
PCAT18-201ENST00000579458 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
PCAT18-201ENST00000579458 DNAJC6O75061 913 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 SF3B2Q13435 895 aaKnown RBP12.11□□□□□ -0.47
PCAT18-201ENST00000579458 INTUQ9ULD6 942 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
PCAT18-201ENST00000579458 HIP1RO75146 1068 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 NDUFV2P19404 249 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
PCAT18-201ENST00000579458 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
PCAT18-201ENST00000579458 RBL2Q08999 1139 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 DRC7Q8IY82 874 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 CASS4Q9NQ75 786 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
PCAT18-201ENST00000579458 DPYSL4O14531 572 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 MFSD10Q14728 455 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 SVIPQ8NHG7 77 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
PCAT18-201ENST00000579458 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 ARMC3Q5W041 872 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 C8orf48Q96LL4 319 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
PCAT18-201ENST00000579458 PAF1Q8N7H5 531 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
PCAT18-201ENST00000579458 IFRD1O00458 451 aaPredicted RBP12.07□□□□□ -0.48
PCAT18-201ENST00000579458 PPCSQ9HAB8 311 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 RNF19AQ9NV58 838 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
PCAT18-201ENST00000579458 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 CCDC174Q6PII3 467 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 SEZ6LQ9BYH1 1024 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 LZTS1Q9Y250 596 aa12.07□□□□□ -0.48
PCAT18-201ENST00000579458 PRSS47A8MTI9 375 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
PCAT18-201ENST00000579458 IFT122Q9HBG6 1241 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
PCAT18-201ENST00000579458 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
PCAT18-201ENST00000579458 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 B4GALNT3Q6L9W6 998 aa12.06□□□□□ -0.48
PCAT18-201ENST00000579458 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
PCAT18-201ENST00000579458 LRRC41Q15345 812 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms