RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 LILRA1O75019 489 aa8.96□□□□□ -0.98
MSH3-202ENST00000512258 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
MSH3-202ENST00000512258 PHF20L1A8MW92 1017 aa8.95□□□□□ -0.98
MSH3-202ENST00000512258 ADH1AP07327 375 aa8.95□□□□□ -0.98
MSH3-202ENST00000512258 CTDSPL2Q05D32 466 aa8.95□□□□□ -0.98
MSH3-202ENST00000512258 MBIPQ9NS73 344 aa8.95□□□□□ -0.98
MSH3-202ENST00000512258 ZNF784Q8NCA9 323 aaPredicted RBP8.94□□□□□ -0.98
MSH3-202ENST00000512258 ENAMQ9NRM1 1142 aa8.94□□□□□ -0.98
MSH3-202ENST00000512258 FKBPLQ9UIM3 349 aa8.94□□□□□ -0.98
MSH3-202ENST00000512258 IGF1RP08069 1367 aa8.94□□□□□ -0.98
MSH3-202ENST00000512258 NESP48681 1621 aa8.94□□□□□ -0.98
MSH3-202ENST00000512258 GPR25O00155 361 aa8.93□□□□□ -0.98
MSH3-202ENST00000512258 PTGIRP43119 386 aa8.93□□□□□ -0.98
MSH3-202ENST00000512258 ACDQ96AP0 544 aa8.93□□□□□ -0.98
MSH3-202ENST00000512258 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
MSH3-202ENST00000512258 LYSMD3Q7Z3D4 306 aa8.92□□□□□ -0.98
MSH3-202ENST00000512258 BEND7Q8N7W2 519 aaPredicted RBP8.92□□□□□ -0.98
MSH3-202ENST00000512258 LRRN4Q8WUT4 740 aa8.92□□□□□ -0.98
MSH3-202ENST00000512258 BCRP11274 1271 aa8.91□□□□□ -0.98
MSH3-202ENST00000512258 DBN1Q16643 649 aa8.91□□□□□ -0.98
MSH3-202ENST00000512258 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
MSH3-202ENST00000512258 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
MSH3-202ENST00000512258 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
MSH3-202ENST00000512258 RHOQP17081 205 aa8.9□□□□□ -0.98
MSH3-202ENST00000512258 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
MSH3-202ENST00000512258 ADAM32Q8TC27 787 aa8.9□□□□□ -0.98
MSH3-202ENST00000512258 CADPSQ9ULU8 1353 aa8.89□□□□□ -0.99
MSH3-202ENST00000512258 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
MSH3-202ENST00000512258 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
MSH3-202ENST00000512258 VSIG10Q8N0Z9 540 aa8.89□□□□□ -0.99
MSH3-202ENST00000512258 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
MSH3-202ENST00000512258 K7ELQ4 463 aaPredicted RBP8.88□□□□□ -0.99
MSH3-202ENST00000512258 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
MSH3-202ENST00000512258 NR6A1Q15406 480 aa8.88□□□□□ -0.99
MSH3-202ENST00000512258 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
MSH3-202ENST00000512258 Q8N3U1 123 aa8.88□□□□□ -0.99
MSH3-202ENST00000512258 GMCL1Q96IK5 515 aa8.88□□□□□ -0.99
MSH3-202ENST00000512258 CFTRP13569 1480 aa8.88□□□□□ -0.99
MSH3-202ENST00000512258 KRBA1A5PL33 1030 aa8.87□□□□□ -0.99
MSH3-202ENST00000512258 ESPNB1AK53 854 aa8.87□□□□□ -0.99
MSH3-202ENST00000512258 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
MSH3-202ENST00000512258 NEDD1Q8NHV4 660 aa8.87□□□□□ -0.99
MSH3-202ENST00000512258 KRTAP9-6A0A140TA67 174 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 AK7Q96M32 723 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 LRRC4BQ9NT99 713 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 GPSM3Q9Y4H4 160 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
MSH3-202ENST00000512258 BAG6P46379 1132 aa8.85□□□□□ -0.99
MSH3-202ENST00000512258 RAB15P59190 212 aa8.85□□□□□ -0.99
MSH3-202ENST00000512258 SNRPNP63162 240 aaKnown RBP8.85□□□□□ -0.99
MSH3-202ENST00000512258 PTK2Q05397 1052 aa8.85□□□□□ -0.99
MSH3-202ENST00000512258 PDE4DQ08499 809 aa8.85□□□□□ -0.99
MSH3-202ENST00000512258 NBPF20Q3BBV1 942 aa8.84□□□□□ -0.99
MSH3-202ENST00000512258 GTPBP3Q969Y2 492 aaKnown RBP8.84□□□□□ -0.99
MSH3-202ENST00000512258 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
MSH3-202ENST00000512258 OIP5O43482 229 aa8.83□□□□□ -1
MSH3-202ENST00000512258 PSMG3-AS1Q96PY0 264 aa8.83□□□□□ -1
MSH3-202ENST00000512258 COL8A1P27658 744 aa8.82□□□□□ -1
MSH3-202ENST00000512258 EPS8L1Q8TE68 723 aa8.82□□□□□ -1
MSH3-202ENST00000512258 CYLDQ9NQC7 956 aa8.81□□□□□ -1
MSH3-202ENST00000512258 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
MSH3-202ENST00000512258 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
MSH3-202ENST00000512258 PRDM2Q13029 1718 aa8.8□□□□□ -1
MSH3-202ENST00000512258 THBS1P07996 1170 aa8.8□□□□□ -1
MSH3-202ENST00000512258 FURINP09958 794 aa8.8□□□□□ -1
MSH3-202ENST00000512258 GPC1P35052 558 aa8.8□□□□□ -1
MSH3-202ENST00000512258 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
MSH3-202ENST00000512258 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
MSH3-202ENST00000512258 FANCD2Q9BXW9 1451 aa8.8□□□□□ -1
MSH3-202ENST00000512258 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
MSH3-202ENST00000512258 SHISA8B8ZZ34 492 aa8.79□□□□□ -1
MSH3-202ENST00000512258 PPP2R2DQ66LE6 453 aa8.79□□□□□ -1
MSH3-202ENST00000512258 FOXR1Q6PIV2 292 aa8.79□□□□□ -1
MSH3-202ENST00000512258 MX2P20592 715 aa8.78□□□□□ -1
MSH3-202ENST00000512258 ERCC6Q03468 1493 aa8.77□□□□□ -1
MSH3-202ENST00000512258 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
MSH3-202ENST00000512258 ITGB7P26010 798 aa8.77□□□□□ -1.01
MSH3-202ENST00000512258 POU4F2Q12837 409 aa8.77□□□□□ -1.01
MSH3-202ENST00000512258 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
MSH3-202ENST00000512258 H7C1W4 665 aa8.76□□□□□ -1.01
MSH3-202ENST00000512258 DZIP3Q86Y13 1208 aaKnown RBP8.76□□□□□ -1.01
MSH3-202ENST00000512258 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
MSH3-202ENST00000512258 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
MSH3-202ENST00000512258 ABCC8Q09428 1581 aa8.76□□□□□ -1.01
MSH3-202ENST00000512258 A0A1W2PRU2 124 aa8.75□□□□□ -1.01
MSH3-202ENST00000512258 ATP5J2-PTCD1G3V325 749 aa8.75□□□□□ -1.01
MSH3-202ENST00000512258 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
MSH3-202ENST00000512258 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
MSH3-202ENST00000512258 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
MSH3-202ENST00000512258 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.75□□□□□ -1.01
MSH3-202ENST00000512258 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
MSH3-202ENST00000512258 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
MSH3-202ENST00000512258 MEN1O00255 615 aa8.73□□□□□ -1.01
MSH3-202ENST00000512258 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
MSH3-202ENST00000512258 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
MSH3-202ENST00000512258 URB2Q14146 1524 aaKnown RBP8.73□□□□□ -1.01
MSH3-202ENST00000512258 SPATA31C2B4DYI2 1134 aa8.72□□□□□ -1.01
MSH3-202ENST00000512258 MAP2K3P46734 347 aa8.72□□□□□ -1.01
MSH3-202ENST00000512258 LINC00114Q6XXX2 140 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms