RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 FEZ2Q9UHY8 353 aaPredicted RBP5.57□□□□□ -1.52
DEPDC1-202ENST00000456315 KIF3AQ9Y496 699 aa5.57□□□□□ -1.52
DEPDC1-202ENST00000456315 TFRCP02786 760 aaKnown RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 U2AF1L5P0DN76 240 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 PTGS1P23219 599 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 U2AF1Q01081 240 aaKnown RBP eCLIP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 USP48Q86UV5 1035 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 PDCL2Q8N4E4 241 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 HNRNPH2P55795 449 aaKnown RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 ST5P78524 1137 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 ERCC4Q92889 916 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 C16orf45Q96MC5 204 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 NPHP1O15259 732 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 RUNDC1Q96C34 613 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 CUL4AQ13619 759 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 SECISBP2LQ93073 1101 aaKnown RBP5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 GGNBP2Q9H3C7 697 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 SYNJ2O15056 1496 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 DNMBPQ6XZF7 1577 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 ADAMTSL3P82987 1691 aa5.56□□□□□ -1.52
DEPDC1-202ENST00000456315 AEBP1Q8IUX7 1158 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 ERICH4A6NGS2 130 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 NEK4P51957 841 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 AFAP1Q8N556 730 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 TRAK1Q9UPV9 953 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 CHRM1P11229 460 aaPredicted RBP5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 LUZP1Q86V48 1076 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 CNPY2Q9Y2B0 182 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 LOC400499M0QZD8 3231 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 PLXNC1O60486 1568 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 ATP10BO94823 1461 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 WDR63Q8IWG1 891 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 SRCIN1Q9C0H9 1055 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 CHGBP05060 677 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 LIG1P18858 919 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 MEIS3Q99687 375 aa5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.55□□□□□ -1.52
DEPDC1-202ENST00000456315 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 GTPBP4Q9BZE4 634 aaKnown RBP5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 MED14O60244 1454 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 ADGBQ8N7X0 1667 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 TSPY4P0CV99 314 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 TSPY10P0CW01 314 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 PLA2G4AP47712 749 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 CCDC27Q2M243 656 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 RGS12O14924 1447 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 NSD3Q9BZ95 1437 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 ZNF518AQ6AHZ1 1483 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 SASH3O75995 380 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 SKOR2Q2VWA4 1001 aaPredicted RBP5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 FOXR1Q6PIV2 292 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 FTSJ3Q8IY81 847 aaKnown RBP5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 CUL7Q14999 1698 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 IQGAP2Q13576 1575 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 PTPN21Q16825 1174 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 TTC6Q86TZ1 520 aa5.54□□□□□ -1.52
DEPDC1-202ENST00000456315 CCDC186Q7Z3E2 898 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 VPS13AQ96RL7 3174 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 CCDC141Q6ZP82 1450 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 DMDP11532 3685 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 TRIM6-TRIM34B2RNG4 842 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 LETM1O95202 739 aaPredicted RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 NUTM2DQ5VT03 806 aaPredicted RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 REXO1L1PQ8IX06 675 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 TRIM34Q9BYJ4 488 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 CHMP3Q9Y3E7 222 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 RPAP1Q9BWH6 1393 aaPredicted RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 KDM5AP29375 1690 aaKnown RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 CEP152O94986 1710 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 NEK11Q8NG66 645 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 PRAM1Q96QH2 718 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 DCTPP1Q9H773 170 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 ZRANB1Q9UGI0 708 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 FHOD1Q9Y613 1164 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 DNTTIP2Q5QJE6 756 aaKnown RBP5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 AATKQ6ZMQ8 1374 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 MYO5CQ9NQX4 1742 aa5.53□□□□□ -1.52
DEPDC1-202ENST00000456315 ADCY9O60503 1353 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 RAD51AP2Q09MP3 1159 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 ADCK5Q3MIX3 580 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 TCEANC2Q96MN5 208 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 DDX19BQ9UMR2 479 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 SCAPERQ9BY12 1400 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 FYB1O15117 783 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 KDM4AO75164 1064 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 PLCB2Q00722 1185 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 GTF3C6Q969F1 213 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 SYT1P21579 422 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 MCM5P33992 734 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 POLKQ9UBT6 870 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 ZFHX3Q15911 3703 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 WDFY4Q6ZS81 3184 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 SRPK2P78362 688 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms