RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KANK1Q14678 1352 aa12.09□□□□□ -0.47
LIN54-202ENST00000442461 EPB41L2O43491 1005 aaKnown RBP12.09□□□□□ -0.47
LIN54-202ENST00000442461 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
LIN54-202ENST00000442461 ZSCAN26Q16670 478 aa12.08□□□□□ -0.47
LIN54-202ENST00000442461 DNAI1Q9UI46 699 aa12.08□□□□□ -0.47
LIN54-202ENST00000442461 CTAGE5O15320 804 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
LIN54-202ENST00000442461 PTGS1P23219 599 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 NBPF11Q86T75 865 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 FERMT3Q86UX7 667 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.08□□□□□ -0.48
LIN54-202ENST00000442461 VPS18Q9P253 973 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 GOLIM4O00461 696 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
LIN54-202ENST00000442461 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
LIN54-202ENST00000442461 SOX12O15370 315 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 GNG11P61952 73 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 OTUD6BQ8N6M0 293 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
LIN54-202ENST00000442461 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
LIN54-202ENST00000442461 TSR2Q969E8 191 aaKnown RBP12.07□□□□□ -0.48
LIN54-202ENST00000442461 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
LIN54-202ENST00000442461 ERLIN2O94905 339 aa12.07□□□□□ -0.48
LIN54-202ENST00000442461 HSPA4P34932 840 aa12.07□□□□□ -0.48
LIN54-202ENST00000442461 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
LIN54-202ENST00000442461 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIN54-202ENST00000442461 GAS2L3Q86XJ1 694 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
LIN54-202ENST00000442461 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 LIG1P18858 919 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 NAA25Q14CX7 972 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 ZSWIM4Q9H7M6 989 aa12.06□□□□□ -0.48
LIN54-202ENST00000442461 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
LIN54-202ENST00000442461 STK26Q9P289 416 aa12.05□□□□□ -0.48
LIN54-202ENST00000442461 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
LIN54-202ENST00000442461 MTHFSP49914 203 aa12.05□□□□□ -0.48
LIN54-202ENST00000442461 FMNL3Q8IVF7 1028 aa12.05□□□□□ -0.48
LIN54-202ENST00000442461 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
LIN54-202ENST00000442461 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 GOLGA6L10A0A0M3HER8 536 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 STX6O43752 255 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
LIN54-202ENST00000442461 ELF2Q15723 593 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 RSRC1Q96IZ7 334 aaKnown RBP12.04□□□□□ -0.48
LIN54-202ENST00000442461 CLSTN1O94985 981 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 GNAI3P08754 354 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 LRRFIP1Q32MZ4 808 aaKnown RBP12.04□□□□□ -0.48
LIN54-202ENST00000442461 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 HFM1A2PYH4 1435 aa12.04□□□□□ -0.48
LIN54-202ENST00000442461 STX1AQ16623 288 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
LIN54-202ENST00000442461 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 GOLGA1Q92805 767 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
LIN54-202ENST00000442461 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 TUBB4BP68371 445 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 TAX1BP1Q86VP1 789 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 TMX3Q96JJ7 454 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 SRCIN1Q9C0H9 1055 aa12.03□□□□□ -0.48
LIN54-202ENST00000442461 TRDNQ13061 729 aa12.02□□□□□ -0.48
LIN54-202ENST00000442461 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.48
LIN54-202ENST00000442461 POTEDQ86YR6 584 aa12.02□□□□□ -0.48
LIN54-202ENST00000442461 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.48
LIN54-202ENST00000442461 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.48
LIN54-202ENST00000442461 PHACTR2O75167 634 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 TUBBP07437 444 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.49
LIN54-202ENST00000442461 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
LIN54-202ENST00000442461 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
LIN54-202ENST00000442461 HIP1O00291 1037 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 STK3Q13188 491 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
LIN54-202ENST00000442461 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
LIN54-202ENST00000442461 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 JRKLQ9Y4A0 524 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
LIN54-202ENST00000442461 CCDC175P0C221 793 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 NEBLO76041 1014 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 CCDC172P0C7W6 258 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
LIN54-202ENST00000442461 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
LIN54-202ENST00000442461 ERBB4Q15303 1308 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms