RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 BMP2KLQ5H9B9 411 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 TRERF1Q96PN7 1200 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 FILIP1LQ4L180 1135 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 ISM2Q6H9L7 571 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 GIMAP6Q6P9H5 292 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 TMCO3Q6UWJ1 677 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 UBXN4Q92575 508 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 DNMBPQ6XZF7 1577 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 CCP110O43303 1012 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 HCLS1P14317 486 aaPredicted RBP4.95□□□□□ -1.62
BRCA2-201ENST00000380152 DDX54Q8TDD1 881 aaKnown RBP4.95□□□□□ -1.62
BRCA2-201ENST00000380152 CFAP100Q494V2 611 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 ZNF396Q96N95 335 aaPredicted RBP4.95□□□□□ -1.62
BRCA2-201ENST00000380152 TOPBP1Q92547 1522 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 XBP1P17861 261 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC102AQ96A19 550 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 FKBP4Q02790 459 aaKnown RBP eCLIP4.95□□□□□ -1.62
BRCA2-201ENST00000380152 RBM42Q9BTD8 480 aaKnown RBP4.95□□□□□ -1.62
BRCA2-201ENST00000380152 ASXL1Q8IXJ9 1541 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 FAM177BA6PVY3 158 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 HDGFL1Q5TGJ6 251 aa4.95□□□□□ -1.62
BRCA2-201ENST00000380152 F6X3S4 739 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 POLR3GO15318 223 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 EPS15P42566 896 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 CDR1P51861 262 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 ABTB2Q8N961 1025 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 TRIM34Q9BYJ4 488 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 NUCB1Q02818 461 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 DHX16O60231 1041 aaKnown RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 FCHSD2O94868 740 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 UBE2HP62256 183 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 TSHZ3Q63HK5 1081 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 DDX11Q96FC9 970 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 STK38Q15208 465 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 C16orf71Q8IYS4 520 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 FYB1O15117 783 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 IGSF3O75054 1194 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 GUCY1B3Q02153 619 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 TMX1Q9H3N1 280 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 EIF3JO75822 258 aaKnown RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 URI1O94763 535 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 MCM10Q7L590 875 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 SYTL4Q96C24 671 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 GRIN2BQ13224 1484 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 PTPRKQ15262 1439 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 CASQ1P31415 396 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 ALDH1L2Q3SY69 923 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 FAM135AQ9P2D6 1515 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 ZBTB9Q96C00 473 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 EVA1CP58658 441 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 FAM193AP78312 1265 aa4.94□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC47Q96A33 483 aaKnown RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 TROQ12816 1431 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-201ENST00000380152 ZKSCAN5Q9Y2L8 839 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 LRRFIP2Q9Y608 721 aaKnown RBP4.93□□□□□ -1.62
BRCA2-201ENST00000380152 TRHP20396 242 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-201ENST00000380152 NLRP6P59044 892 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 TFIP11Q9UBB9 837 aaKnown RBP4.93□□□□□ -1.62
BRCA2-201ENST00000380152 MTMR7Q9Y216 660 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 G3V3G9 751 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 HSP90AB3PQ58FF7 597 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 DCAF8Q5TAQ9 597 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 PRIMPOLQ96LW4 560 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 CENPHQ9H3R5 247 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 BRMS1Q9HCU9 246 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 STX6O43752 255 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 GJB2P29033 226 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 MX1P20591 662 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 MCM5P33992 734 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 RRP12Q5JTH9 1297 aaKnown RBP4.93□□□□□ -1.62
BRCA2-201ENST00000380152 TMX3Q96JJ7 454 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 DEF6Q9H4E7 631 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 PAXBP1Q9Y5B6 917 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 RAB11FIP3O75154 756 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 AACSQ86V21 672 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 ERC1Q8IUD2 1116 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 POLR1AO95602 1720 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-201ENST00000380152 NFE2L2Q16236 605 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 ODF2Q5BJF6 829 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 TXNDC2Q86VQ3 553 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 SRCAPQ6ZRS2 3230 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 GCC2Q8IWJ2 1684 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC181Q5TID7 509 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 GAS2L2Q8NHY3 880 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 SMTNL1A8MU46 457 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 USP48Q86UV5 1035 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 AMOTL1Q8IY63 956 aa4.93□□□□□ -1.62
BRCA2-201ENST00000380152 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 BTBD11A6QL63 1104 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 SFPQP23246 707 aaKnown RBP eCLIP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 HDAC1Q13547 482 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 UGGT2Q9NYU1 1516 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 RAB3GAP1Q15042 981 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 CEP135Q66GS9 1140 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 PPFIBP1Q86W92 1011 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 TNNQ9UQP3 1299 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ADGBQ8N7X0 1667 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms