RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 DCAF8L2P0C7V8 631 aa7.05□□□□□ -1.28
BRCA2-201ENST00000380152 NISCHQ9Y2I1 1504 aa6.96□□□□□ -1.29
BRCA2-201ENST00000380152 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
BRCA2-201ENST00000380152 SHROOM4Q9ULL8 1493 aa6.83□□□□□ -1.32
BRCA2-201ENST00000380152 EHMT2Q96KQ7 1210 aa6.74□□□□□ -1.33
BRCA2-201ENST00000380152 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
BRCA2-201ENST00000380152 PELP1Q8IZL8 1130 aaKnown RBP6.57□□□□□ -1.36
BRCA2-201ENST00000380152 FAM9AQ8IZU1 332 aaPredicted RBP6.53□□□□□ -1.36
BRCA2-201ENST00000380152 TTBK1Q5TCY1 1321 aaPredicted RBP6.53□□□□□ -1.36
BRCA2-201ENST00000380152 CENPBP07199 599 aaPredicted RBP6.49□□□□□ -1.37
BRCA2-201ENST00000380152 CCER1Q8TC90 406 aaPredicted RBP6.48□□□□□ -1.37
BRCA2-201ENST00000380152 ZEB1P37275 1124 aaPredicted RBP6.46□□□□□ -1.38
BRCA2-201ENST00000380152 HRCP23327 699 aa6.44□□□□□ -1.38
BRCA2-201ENST00000380152 YTHDC1Q96MU7 727 aaKnown RBP6.42□□□□□ -1.38
BRCA2-201ENST00000380152 APLP2Q06481 763 aa6.41□□□□□ -1.38
BRCA2-201ENST00000380152 PPARGC1BQ86YN6 1023 aaKnown RBP6.41□□□□□ -1.38
BRCA2-201ENST00000380152 MYT1Q01538 1121 aa6.4□□□□□ -1.39
BRCA2-201ENST00000380152 TRIM41Q8WV44 630 aa6.39□□□□□ -1.39
BRCA2-201ENST00000380152 TRIM26Q12899 539 aaPredicted RBP6.38□□□□□ -1.39
BRCA2-201ENST00000380152 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
BRCA2-201ENST00000380152 LOC105371045A0A1W2PR82 267 aa6.35□□□□□ -1.39
BRCA2-201ENST00000380152 RANGAP1P46060 587 aaPredicted RBP6.34□□□□□ -1.39
BRCA2-201ENST00000380152 UBTFP17480 764 aaKnown RBP6.25□□□□□ -1.41
BRCA2-201ENST00000380152 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
BRCA2-201ENST00000380152 CHIC1Q5VXU3 224 aa6.23□□□□□ -1.41
BRCA2-201ENST00000380152 NEFLP07196 543 aa6.22□□□□□ -1.41
BRCA2-201ENST00000380152 ATP1B4Q9UN42 357 aaPredicted RBP6.22□□□□□ -1.41
BRCA2-201ENST00000380152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.21□□□□□ -1.41
BRCA2-201ENST00000380152 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
BRCA2-201ENST00000380152 HNRNPUL2Q1KMD3 747 aaKnown RBP6.13□□□□□ -1.43
BRCA2-201ENST00000380152 ITGAEP38570 1179 aa6.12□□□□□ -1.43
BRCA2-201ENST00000380152 CNGB1Q14028 1251 aaPredicted RBP6.07□□□□□ -1.44
BRCA2-201ENST00000380152 ACIN1Q9UKV3 1341 aaKnown RBP6.06□□□□□ -1.44
BRCA2-201ENST00000380152 BCANQ96GW7 911 aa6.03□□□□□ -1.44
BRCA2-201ENST00000380152 DAXXQ9UER7 740 aaPredicted RBP6.03□□□□□ -1.44
BRCA2-201ENST00000380152 SCAF1Q9H7N4 1312 aaKnown RBP6.02□□□□□ -1.45
BRCA2-201ENST00000380152 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
BRCA2-201ENST00000380152 ZNF316A6NFI3 1004 aaPredicted RBP6□□□□□ -1.45
BRCA2-201ENST00000380152 NEUROD1Q13562 356 aa5.99□□□□□ -1.45
BRCA2-201ENST00000380152 CCDC180Q9P1Z9 1646 aa5.98□□□□□ -1.45
BRCA2-201ENST00000380152 RTL5Q5HYW3 569 aaPredicted RBP5.97□□□□□ -1.45
BRCA2-201ENST00000380152 MYO15BQ96JP2 1530 aa5.95□□□□□ -1.46
BRCA2-201ENST00000380152 CDK11AQ9UQ88 783 aaPredicted RBP5.95□□□□□ -1.46
BRCA2-201ENST00000380152 DCAF1Q9Y4B6 1507 aa5.95□□□□□ -1.46
BRCA2-201ENST00000380152 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
BRCA2-201ENST00000380152 ANP32CO43423 234 aa5.91□□□□□ -1.46
BRCA2-201ENST00000380152 FKBP8Q14318 412 aa5.91□□□□□ -1.46
BRCA2-201ENST00000380152 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.46
BRCA2-201ENST00000380152 CLSPNQ9HAW4 1339 aa5.89□□□□□ -1.47
BRCA2-201ENST00000380152 MIER1Q8N108 512 aa5.85□□□□□ -1.47
BRCA2-201ENST00000380152 TRIM52Q96A61 297 aa5.84□□□□□ -1.47
BRCA2-201ENST00000380152 NBR1Q14596 966 aa5.84□□□□□ -1.48
BRCA2-201ENST00000380152 EIF5BO60841 1220 aaKnown RBP5.83□□□□□ -1.48
BRCA2-201ENST00000380152 SLC4A1APQ9BWU0 796 aaKnown RBP5.83□□□□□ -1.48
BRCA2-201ENST00000380152 SCRIBQ14160 1630 aa5.83□□□□□ -1.48
BRCA2-201ENST00000380152 ANP32AP39687 249 aaKnown RBP5.83□□□□□ -1.48
BRCA2-201ENST00000380152 DDX10Q13206 875 aaKnown RBP5.82□□□□□ -1.48
BRCA2-201ENST00000380152 NPM2Q86SE8 214 aaKnown RBP5.82□□□□□ -1.48
BRCA2-201ENST00000380152 HNRNPUQ00839 825 aaKnown RBP eCLIP5.81□□□□□ -1.48
BRCA2-201ENST00000380152 MYT1LQ9UL68 1186 aa5.81□□□□□ -1.48
BRCA2-201ENST00000380152 ZNF326Q5BKZ1 582 aaKnown RBP5.79□□□□□ -1.48
BRCA2-201ENST00000380152 FAM9BQ8IZU0 186 aa5.78□□□□□ -1.48
BRCA2-201ENST00000380152 HIRIP3Q9BW71 556 aaPredicted RBP5.77□□□□□ -1.49
BRCA2-201ENST00000380152 IRX6P78412 446 aaPredicted RBP5.77□□□□□ -1.49
BRCA2-201ENST00000380152 CSRNP3Q8WYN3 585 aa5.77□□□□□ -1.49
BRCA2-201ENST00000380152 ABCC9O60706 1549 aa5.76□□□□□ -1.49
BRCA2-201ENST00000380152 SALL2Q9Y467 1007 aaPredicted RBP5.76□□□□□ -1.49
BRCA2-201ENST00000380152 P3H3Q8IVL6 736 aa5.76□□□□□ -1.49
BRCA2-201ENST00000380152 ANP32EQ9BTT0 268 aa5.75□□□□□ -1.49
BRCA2-201ENST00000380152 BCL11AQ9H165 835 aa5.75□□□□□ -1.49
BRCA2-201ENST00000380152 PABPN1Q86U42 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
BRCA2-201ENST00000380152 ZBTB47Q9UFB7 747 aaPredicted RBP5.75□□□□□ -1.49
BRCA2-201ENST00000380152 TONSLQ96HA7 1378 aa5.72□□□□□ -1.49
BRCA2-201ENST00000380152 ARXQ96QS3 562 aa5.71□□□□□ -1.49
BRCA2-201ENST00000380152 CCDC136Q96JN2 1154 aa5.71□□□□□ -1.49
BRCA2-201ENST00000380152 SUPT16HQ9Y5B9 1047 aaKnown RBP5.71□□□□□ -1.5
BRCA2-201ENST00000380152 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
BRCA2-201ENST00000380152 TMC1Q8TDI8 760 aa5.69□□□□□ -1.5
BRCA2-201ENST00000380152 ARID3CA6NKF2 412 aa5.68□□□□□ -1.5
BRCA2-201ENST00000380152 GLIPR1L2Q4G1C9 344 aa5.68□□□□□ -1.5
BRCA2-201ENST00000380152 RTN4Q9NQC3 1192 aaKnown RBP5.67□□□□□ -1.5
BRCA2-201ENST00000380152 CEP162Q5TB80 1403 aa5.66□□□□□ -1.5
BRCA2-201ENST00000380152 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
BRCA2-201ENST00000380152 MRS2Q9HD23 443 aa5.65□□□□□ -1.5
BRCA2-201ENST00000380152 HSP90AA1P07900 732 aaKnown RBP5.65□□□□□ -1.51
BRCA2-201ENST00000380152 UPF2Q9HAU5 1272 aaKnown RBP5.65□□□□□ -1.51
BRCA2-201ENST00000380152 RBM19Q9Y4C8 960 aaKnown RBP5.65□□□□□ -1.51
BRCA2-201ENST00000380152 ANP32BQ92688 251 aaKnown RBP5.64□□□□□ -1.51
BRCA2-201ENST00000380152 SLC24A1O60721 1099 aa5.64□□□□□ -1.51
BRCA2-201ENST00000380152 CHIC2Q9UKJ5 165 aa5.63□□□□□ -1.51
BRCA2-201ENST00000380152 ZNF777Q9ULD5 760 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-201ENST00000380152 CLIP1P30622 1438 aa5.62□□□□□ -1.51
BRCA2-201ENST00000380152 NEFMP07197 916 aa5.62□□□□□ -1.51
BRCA2-201ENST00000380152 RB1CC1Q8TDY2 1594 aa5.62□□□□□ -1.51
BRCA2-201ENST00000380152 FBLN2P98095 1184 aa5.62□□□□□ -1.51
BRCA2-201ENST00000380152 B4GALNT3Q6L9W6 998 aa5.61□□□□□ -1.51
BRCA2-201ENST00000380152 EIF4G2P78344 907 aaKnown RBP eCLIP5.61□□□□□ -1.51
BRCA2-201ENST00000380152 RSF1Q96T23 1441 aaPredicted RBP5.61□□□□□ -1.51
BRCA2-201ENST00000380152 GOLGA3Q08378 1498 aa5.6□□□□□ -1.51
BRCA2-201ENST00000380152 KDM2AQ9Y2K7 1162 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms