RNA–Protein interactions for RNA: ENST00000055682.10

NEXMIF-201, Transcript of neurite extension and migration factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEXMIF, Length 11,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEXMIF-201ENST00000055682 CCDC175P0C221 793 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 PAFAH1B1P43034 410 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 CASQ1P31415 396 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 CETN1Q12798 172 aa13.38□□□□□ -0.27
NEXMIF-201ENST00000055682 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 HMOX1P09601 288 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
NEXMIF-201ENST00000055682 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 HOMER2Q9NSB8 354 aa13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
NEXMIF-201ENST00000055682 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 GOLGA6L9A6NEM1 432 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 TDO2P48775 406 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 CTAGE5O15320 804 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
NEXMIF-201ENST00000055682 SPECC1Q5M775 1068 aa13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 CTNNA2P26232 953 aa13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 PYM1Q9BRP8 204 aaKnown RBP13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
NEXMIF-201ENST00000055682 PLVAPQ9BX97 442 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 ANO10Q9NW15 660 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 NEMFO60524 1076 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 KDM4AO75164 1064 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 GOPCQ9HD26 462 aa13.33□□□□□ -0.28
NEXMIF-201ENST00000055682 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 ABTB2Q8N961 1025 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 IFI16Q16666 785 aaKnown RBP13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 TMEM87AQ8NBN3 555 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 DAAM2Q86T65 1068 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 ZWINTO95229 277 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 ALS2CR12Q96Q35 445 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 NLRP6P59044 892 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
NEXMIF-201ENST00000055682 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 ERICH4A6NGS2 130 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 STXBP4Q6ZWJ1 553 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 IKBKGQ9Y6K9 419 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 UBE4AQ14139 1066 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
NEXMIF-201ENST00000055682 GSDMDP57764 484 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 STK3Q13188 491 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 SCAND2PQ9GZW5 306 aaPredicted RBP13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 ESPNB1AK53 854 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 HMGB1P1B2RPK0 211 aaPredicted RBP13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 CCDC172P0C7W6 258 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 AMPD3Q01432 767 aa13.3□□□□□ -0.28
NEXMIF-201ENST00000055682 AKAP2Q9Y2D5 859 aa13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 ACTN2P35609 894 aa13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 IL27Q8NEV9 243 aa13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 ZSCAN30Q86W11 494 aa13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
NEXMIF-201ENST00000055682 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms