RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Pcdh10E9PXQ7 1057 aa13.09□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Gse1Q3U3C9 1213 aa13.09□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Camta1A2A891 1682 aa13.09□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Pibf1E9Q6K3 756 aa13.08□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Hs1bp3Q3TC93 395 aa13.08□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Ppp1r9bQ6R891 817 aaKnown RBP13.08□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Rims2Q9EQZ7 1530 aa13.08□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Ankrd44B2RXR6 993 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Eya1P97767 591 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Ggnbp2Q5SV77 696 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Ccne1Q61457 408 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Slc35g1Q8BY79 368 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Lmtk3Q5XJV6 1424 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Dnajc5P60904 198 aa13.07□□□□□ -0.32
Ptpre-208ENSMUST00000211788 ArxO35085 564 aa13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 DekQ7TNV0 380 aaKnown RBP13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Ric3Q8BPM6 367 aa13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Scn7aB1AYL1 1681 aa13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Rtf1A2AQ19 715 aaKnown RBP13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 SkilQ60665 675 aa13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Cavin2Q63918 418 aaKnown RBP13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Phlpp2Q8BXA7 1320 aa13.06□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Snap23O09044 210 aa13.05□□□□□ -0.32
Ptpre-208ENSMUST00000211788 C3P01027 1663 aa13.05□□□□□ -0.32
Ptpre-208ENSMUST00000211788 MarsQ68FL6 902 aaKnown RBP13.05□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Map7O88735 730 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Hoxc9P09633 260 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Prim1P20664 417 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Irf5P56477 497 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 MlecQ6ZQI3 291 aaKnown RBP13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Dhx30Q99PU8 1217 aaKnown RBP13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Chmp4bQ9D8B3 224 aaKnown RBP13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Topaz1E5FYH1 1653 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Aifm3Q3TY86 605 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Tmem132eQ6IEE6 982 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Kif18aQ91WD7 886 aa13.04□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Aplp1Q03157 653 aa13.03□□□□□ -0.32
Ptpre-208ENSMUST00000211788 Kif24Q6NWW5 1356 aa13.02□□□□□ -0.32
Ptpre-208ENSMUST00000211788 VgfQ0VGU4 617 aa13.02□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Trim44Q9QXA7 346 aa13.02□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Tns3Q5SSZ5 1440 aa13.02□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Slit2Q9R1B9 1521 aa13.02□□□□□ -0.33
Ptpre-208ENSMUST00000211788 PtprvP70289 1705 aa13.02□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Mfap1aC0HKD8 439 aaKnown RBP13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Mfap1bC0HKD9 439 aaKnown RBP13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Chl1P70232 1209 aa13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Ube2q2Q8K2Z8 378 aa13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Brd1E9PZ26 1189 aaKnown RBP13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Cog6Q8R3I3 657 aa13.01□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Tbc1d32Q3URV1 1296 aa13□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Ripk4Q9ERK0 786 aa13□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Fyb1O35601 819 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Wwc1Q5SXA9 1104 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Antxr1Q9CZ52 562 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Col14a1Q80X19 1797 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Ptpn23Q6PB44 1692 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Tmem2Q5FWI3 1383 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Sipa1l2Q80TE4 1722 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Tet3Q8BG87 1668 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Mcm4P49717 862 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 HypkQ9CR41 129 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Adgrb1Q3UHD1 1582 aa12.99□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Triml2E9PW10 424 aa12.98□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Trim27Q62158 513 aa12.98□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Ano8Q6PB70 1060 aa12.98□□□□□ -0.33
Ptpre-208ENSMUST00000211788 KnstrnQ9D9Z1 312 aaKnown RBP12.98□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Rad17Q6NXW6 688 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Rab11fip3Q8CHD8 1047 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 CarsQ9ER72 831 aaKnown RBP12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Ncapd2Q8K2Z4 1392 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Sv2bQ8BG39 683 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 TatQ8QZR1 454 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Fbxo3Q9DC63 480 aa12.97□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Rabep1O35551 862 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 LifrP42703 1092 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Fbxo2Q80UW2 297 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Tmem132aQ922P8 1018 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Trpm3Q5F4S9 1721 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 ScaperF8VQ70 1398 aaKnown RBP12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Rimbp3Q3V0F0 1606 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Thsd7aQ69ZU6 1645 aa12.96□□□□□ -0.33
Ptpre-208ENSMUST00000211788 Sptbn5F6UCX4 1208 aa12.96□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Q3TQI7 289 aaKnown RBP12.96□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Tnpo1Q8BFY9 898 aaKnown RBP12.96□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Aldh1l2Q8K009 923 aa12.96□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Cetn4Q8K4K1 168 aa12.96□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Kiaa0753Q6A000 959 aa12.95□□□□□ -0.34
Ptpre-208ENSMUST00000211788 HnrnpuQ8VEK3 800 aaKnown RBP12.95□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Pdia4P08003 638 aaKnown RBP12.95□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Gimap6Q8K349 305 aa12.95□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Amotl2Q8K371 772 aa12.95□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Ahnak2E9PYB0 1738 aaKnown RBP12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Fam83gQ5SWY7 812 aa12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Gsdma3Q5Y4Y6 464 aa12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Wdr63B2RY71 923 aa12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Prkar2bP31324 416 aa12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Ncoa4Q5U4H9 625 aa12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Eif4g2Q62448 906 aaKnown RBP12.94□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Wdr17E9Q271 1322 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms