RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Stk11ipQ3TAA7 1072 aa13.19□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Birc3O08863 600 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 NktrP30415 1453 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Ccdc173A0JLY1 547 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Syce3B5KM66 88 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 NexnQ7TPW1 607 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Ap3b2Q9JME5 1082 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Gm45015A0A140LII9 184 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Gm18336A0A140LIU8 765 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 NcapgE9PWG6 1004 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Q9D2X8 372 aa13.18□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Lekr1B2RVN1 116 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Zfp777B9EKF4 885 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 MccE9PWI3 1003 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Gzf1Q4VBD9 706 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 AnlnQ8K298 1121 aaKnown RBP13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 AdgbG3UZ78 1657 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Zkscan16A2ALW2 728 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Zscan25B2RX31 543 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Cabp2Q9JLK4 216 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Abca14E9Q8F8 1683 aa13.17□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Vwa3bJ9JI28 736 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Hoxa7P02830 229 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 St18Q80TY4 1045 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Rsph6aQ8CDR2 708 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Rtf1A2AQ19 715 aaKnown RBP13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Zkscan2G3X952 960 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Smarce1O54941 411 aaKnown RBP13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Mindy4Q3UQI9 744 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Pnma3Q8JZW8 466 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 LlphQ9D945 130 aaKnown RBP13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Map3k19E9Q3S4 1311 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Uhrf1bp1lA2RSJ4 1457 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 PtprtQ99M80 1454 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Hoxb7P09024 217 aa13.16□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Prkar2bP31324 416 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Filip1lQ6P6L0 1131 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Smarca5Q91ZW3 1051 aaKnown RBP13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Gdpd2Q9ESM6 539 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Ahdc1Q6PAL7 1594 aaKnown RBP13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Chl1P70232 1209 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Atg4a-psA0A0G2JFS9 396 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Atg4aQ8C9S8 396 aa13.15□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Anapc15P60007 132 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Pank2Q3U4S0 443 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Anp32cQ64G17 123 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Stk31Q99MW1 1018 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Frmpd2A0A140LI67 1392 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Irf5P56477 497 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Dnajc5P60904 198 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Q9D9H8 365 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 RereQ80TZ9 1558 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Qser1A2BIE1 1698 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Kif1aP33173 1695 aa13.14□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Dip2cE9PWR4 1557 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Fam184aE9PW83 1143 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Phf23Q8BSN5 401 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Kif3aP28741 701 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Wdr78E9PYY5 807 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Tbc1d31Q6NXY1 996 aa13.13□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Gadd45bP22339 160 aa13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Rnf214Q8BFU3 668 aaKnown RBP13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Rps6ka5Q8C050 863 aa13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Senp3Q9EP97 568 aaKnown RBP13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 PplQ9R269 1755 aa13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 KinQ8K339 391 aa13.12□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Rbm27Q5SFM8 1060 aaKnown RBP13.11□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Klhdc4Q921I2 584 aa13.11□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Mcm10Q0VBD2 885 aa13.11□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Nol8Q3UHX0 1147 aaKnown RBP13.11□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Ecm2Q5FW85 670 aa13.11□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Aifm3Q3TY86 605 aa13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Ddx19aQ61655 478 aaKnown RBP13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Idi2Q8BFZ6 227 aa13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Nol11Q8BJW5 723 aaKnown RBP13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Noc3lQ8VI84 807 aaKnown RBP13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Gm45140A0A0N4SUM8 220 aa13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Pabpn1Q8CCS6 302 aaKnown RBP13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Casc1Q6TDU8 730 aa13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Bcar3Q9QZK2 820 aa13.1□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Strn4P58404 760 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Rsph4aQ8BYM7 716 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Nphp1Q9QY53 687 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 4930407I10RikD3Z5T8 1512 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 RestQ8VIG1 1082 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Tbc1d30Q69ZT9 766 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 Olfml1Q8BSH2 233 aa13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 SrrtQ99MR6 875 aaKnown RBP13.09□□□□□ -0.31
Rnf40-206ENSMUST00000206914 EzrP26040 586 aaKnown RBP13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Chd1lQ9CXF7 900 aa13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Hsp90b1P08113 802 aaKnown RBP13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Gnai2P08752 355 aaKnown RBP13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 MsnP26041 577 aaKnown RBP13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ptpdc1Q6NZK8 747 aa13.08□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Phactr2B1AVP0 632 aa13.07□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Hvcn1Q3U2S8 269 aa13.07□□□□□ -0.32
Rnf40-206ENSMUST00000206914 NpatQ8BMA5 1420 aa13.07□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ccdc7Q9D541 371 aa13.07□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Nwd1A6H603 1563 aa13.07□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Adgrb1Q3UHD1 1582 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 474.7 ms