RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 UvssaQ9D479 717 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Stk3Q9JI10 497 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Hmgb2P30681 210 aaKnown RBP16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Kcnh8P59111 1102 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Rad17Q6NXW6 688 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Gimap5Q8BWF2 308 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Rnf17Q99MV7 1640 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Prl7d1P04769 244 aa16.57■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Fhod3Q76LL6 1578 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Kdm6bQ5NCY0 1641 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Cers3Q1A3B0 383 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Utp3Q9JI13 469 aaKnown RBP16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Mcm10Q0VBD2 885 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Ppm1fQ8CGA0 452 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Lamc1P02468 1607 aaKnown RBP16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Fkbp5Q64378 456 aa16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Smc5Q8CG46 1101 aaKnown RBP16.56■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Col17a1Q07563 1470 aa16.55■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Tpd52l1O54818 204 aa16.55■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Map3k19E9Q3S4 1311 aa16.55■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Mroh2aD3Z750 1679 aa16.55■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Zkscan1Q8BGS3 561 aaKnown RBP16.55■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Eif4a2P10630 407 aa16.54■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Prkar2bP31324 416 aa16.54■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Amotl1Q9D4H4 968 aa16.54■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Kif14L0N7N1 1674 aaKnown RBP16.54■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Map3k13Q1HKZ5 959 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Jmjd4Q8BFT6 427 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Slc5a4bQ91ZP4 660 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Cct4P80315 539 aaKnown RBP16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Pde4dQ01063 747 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Nos1Q9Z0J4 1429 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Gsdma2Q32M21 443 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Ttc19Q8CC21 365 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Acsbg1Q99PU5 721 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Atp10aO54827 1508 aa16.53■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Tmc1Q8R4P5 757 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Gm21969J3QJZ1 289 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Tubb6Q922F4 447 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Ccdc34Q3UI66 367 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Cavin2Q63918 418 aaKnown RBP16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Nlrp3Q8R4B8 1033 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Mapk8ip1Q9WVI9 707 aa16.52■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Ankrd44B2RXR6 993 aa16.52■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Chpf2Q3UU43 768 aa16.52■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ddx58Q6Q899 926 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Rbm5Q91YE7 815 aaKnown RBP16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Depdc5P61460 1591 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Tmem132eQ6IEE6 982 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Gm16486A0A1D5RMD1 1434 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Cplx1P63040 134 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ptpdc1Q6NZK8 747 aa16.51■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Chrna2Q91X60 512 aa16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 PdcQ9QW08 244 aa16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Dhx8A2A4P0 1244 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ankib1Q6ZPS6 1085 aa16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Nol8Q3UHX0 1147 aaKnown RBP16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Plxnc1Q9QZC2 1574 aa16.5■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Plekhg1F6S200 1446 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Q9D9S1 216 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Znf335A2A5K6 1337 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 NaspQ99MD9 773 aaKnown RBP16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ssh1Q76I79 1042 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ppp1r42Q8R1Z4 357 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Odf2lQ9D478 642 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Echdc1Q9D9V3 322 aa16.49■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Irf9Q61179 399 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Tomm22Q9CPQ3 142 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 NgdnQ9DB96 315 aaKnown RBP16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Tom1O88746 492 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ccdc155Q80VJ8 648 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Hecw1Q8K4P8 1604 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Cdc42bpaQ3UU96 1719 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Cdkn1cP49919 348 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Dnajc10Q9DC23 793 aa16.48■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 A0A1L1SQF0 893 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Exoc5Q3TPX4 708 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ankle2Q6P1H6 964 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Ncbp3Q8BZR9 615 aaKnown RBP16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Me1P06801 572 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Neurl4Q5NCX5 1563 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Pik3r4Q8VD65 1358 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Top1mtQ8R4U6 593 aa16.47■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Amotl2Q8K371 772 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Cfap65Q3V0B4 1847 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Fam184aE9PW83 1143 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Anp32eP97822 260 aaKnown RBP16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Klc3Q91W40 508 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Cfap99A0A140LIX9 648 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Agtpbp1Q641K1 1218 aa16.46■□□□□ 0.23
Pcdha1-202ENSMUST00000193839 Kdm2bQ6P1G2 1309 aa16.46■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Tpm1P58771 284 aa16.45■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ubxn4Q8VCH8 506 aa16.45■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Yeats2Q3TUF7 1407 aa16.45■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ppp1r9bQ6R891 817 aaKnown RBP16.45■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Pde4bB1AWC9 736 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ccp110Q7TSH4 1004 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Jakmip1Q8BVL9 626 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Nop14Q8R3N1 860 aaKnown RBP16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Tarbp1E9Q368 1579 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms