RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Nfat5Q9WV30 1534 aa10.39□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Slc52a2Q9D8F3 450 aa10.39□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Tnrc6bQ8BKI2 1810 aaKnown RBP10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Stag3O70576 1240 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Stk11ipQ3TAA7 1072 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Ksr2Q3UVC0 959 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Atl3Q91YH5 541 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Znf330Q922H9 316 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Ccdc6D3YZP9 469 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Rabep1O35551 862 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Ccar1Q8CH18 1146 aaKnown RBP10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Nectin2P32507 530 aa10.38□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Tnpo1Q8BFY9 898 aaKnown RBP10.37□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Apaf1O88879 1249 aa10.37□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 VgfQ0VGU4 617 aa10.37□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Shq1Q7TMX5 569 aa10.37□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Phlpp2Q8BXA7 1320 aa10.36□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Emilin2Q8K482 1074 aa10.36□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Adamtsl1Q8BLI0 1745 aa10.36□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 U2af1Q9D883 239 aaKnown RBP10.36□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 CenpjQ569L8 1344 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Pnmal2G3X9N3 661 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Tsen2Q6P7W5 460 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Chmp4cQ9D7F7 232 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Gm10563F6WIE4 79 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Ddx17Q501J6 650 aaKnown RBP10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Fam13bQ8K2H3 851 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Ncapd2Q8K2Z4 1392 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Kat6bQ8BRB7 1872 aa10.35□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 IqubQ8CDK3 788 aa10.34□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Hs1bp3Q3TC93 395 aa10.34□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Farp2Q91VS8 1065 aa10.34□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Antxr1Q9CZ52 562 aa10.34□□□□□ -0.75
Cpsf6-208ENSMUST00000177145 Arhgef1Q61210 920 aaKnown RBP10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Lrrc59Q922Q8 307 aaKnown RBP10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ppp1r3fQ9JIG4 799 aa10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Zhx1P70121 873 aa10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Q3UJC8 639 aa10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 MsnP26041 577 aaKnown RBP10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Dusp27Q148W8 1138 aa10.33□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Smim5Q8BT42 78 aa10.32□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Nwd2Q6P5U7 1742 aa10.32□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ssh1Q76I79 1042 aa10.32□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Sirt1Q923E4 737 aa10.32□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Rnf214Q8BFU3 668 aaKnown RBP10.32□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Uhrf1bp1B2KF50 1429 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 AU019823E9PUQ3 292 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Znf541Q0GGX2 1363 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ddrgk1Q80WW9 315 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Dmrt2Q8BG36 561 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Il4rP16382 810 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 CastP51125 788 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Mdc1Q5PSV9 1707 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ttc21aQ8C0S4 1314 aa10.31□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 PogkQ80TC5 607 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Kif2cQ922S8 721 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Phf14Q9D4H9 881 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 InhbeO08717 350 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 4933402E13RikQ9D4D2 429 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Map7O88735 730 aa10.3□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ciz1Q8VEH2 845 aa10.29□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ankrd50F7BE84 1390 aa10.29□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Idi1P58044 227 aa10.29□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Catsper2A2ARP9 588 aa10.29□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Exosc9Q9JHI7 438 aaKnown RBP10.29□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 PaskQ8CEE6 1383 aa10.28□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Maco1Q7TQE6 664 aaKnown RBP10.28□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Cadps2Q8BYR5 1297 aa10.28□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 GnpatP98192 678 aa10.28□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Cavin4A2AMM0 362 aa10.28□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Ccdc171E9Q1U1 1324 aa10.27□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Terf2O35144 541 aa10.27□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Fam43aQ8BUP8 424 aa10.27□□□□□ -0.76
Cpsf6-208ENSMUST00000177145 Cbx1P83917 185 aaKnown RBP10.27□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Kif18aQ91WD7 886 aa10.27□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Wdr17E9Q271 1322 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 FanciQ8K368 1330 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Ccdc60Q8C4J0 545 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Rbm25B2RY56 838 aaKnown RBP10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Pcmtd1P59913 357 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Kiaa0754Q69ZZ9 979 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 SkilQ60665 675 aa10.26□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Ush1cQ9ES64 910 aa10.25□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Irf5P56477 497 aa10.25□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 MpndQ3TV65 487 aa10.25□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Mcm4P49717 862 aa10.25□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Brd1E9PZ26 1189 aaKnown RBP10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 G3bp1P97855 465 aaKnown RBP10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Cog6Q8R3I3 657 aa10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Stk26Q99JT2 416 aa10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Kif20aP97329 887 aa10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Slc34a2Q9DBP0 697 aa10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Fbxo3Q9DC63 480 aa10.24□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Becn1O88597 448 aa10.23□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 KnstrnQ9D9Z1 312 aaKnown RBP10.23□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Nsd3Q6P2L6 1439 aa10.23□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Gm10093D3YYI8 482 aa10.22□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Hdac1O09106 482 aaKnown RBP10.22□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Arfgef2A2A5R2 1792 aa10.22□□□□□ -0.77
Cpsf6-208ENSMUST00000177145 Fchsd2Q3USJ8 740 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms