RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Gm35339A0A140LHH9 1649 aa17.53■□□□□ 0.4
Cpsf6-208ENSMUST00000177145 NischQ80TM9 1593 aa16.74■□□□□ 0.27
Cpsf6-208ENSMUST00000177145 Abcc8B2RUS7 1588 aa16.43■□□□□ 0.22
Cpsf6-208ENSMUST00000177145 Abcc9P70170 1546 aa16.31■□□□□ 0.2
Cpsf6-208ENSMUST00000177145 ScribQ80U72 1612 aa16.13■□□□□ 0.17
Cpsf6-208ENSMUST00000177145 NacadQ5SWP3 1504 aa15.41■□□□□ 0.06
Cpsf6-208ENSMUST00000177145 Kdm5dQ62240 1548 aa15.37■□□□□ 0.05
Cpsf6-208ENSMUST00000177145 Dcaf1Q80TR8 1506 aa15.18■□□□□ 0.02
Cpsf6-208ENSMUST00000177145 Sycp2Q9CUU3 1500 aa15.18■□□□□ 0.02
Cpsf6-208ENSMUST00000177145 BicraF8VPZ9 1578 aa15.12■□□□□ 0.01
Cpsf6-208ENSMUST00000177145 Dnajc5bQ9CQ94 199 aa14.92□□□□□ -0.02
Cpsf6-208ENSMUST00000177145 Thoc2B1AZI6 1594 aaKnown RBP14.8□□□□□ -0.04
Cpsf6-208ENSMUST00000177145 Ccdc180J3QNE4 1664 aa14.62□□□□□ -0.07
Cpsf6-208ENSMUST00000177145 Rb1cc1Q9ESK9 1588 aa14.54□□□□□ -0.08
Cpsf6-208ENSMUST00000177145 Crybg2B7ZCC2 1516 aa14.53□□□□□ -0.08
Cpsf6-208ENSMUST00000177145 Pds5bQ4VA53 1446 aaKnown RBP14.53□□□□□ -0.08
Cpsf6-208ENSMUST00000177145 Rtl1Q7M732 1744 aa14.51□□□□□ -0.09
Cpsf6-208ENSMUST00000177145 Atad2bE9Q166 1460 aaKnown RBP14.38□□□□□ -0.11
Cpsf6-208ENSMUST00000177145 Baz1aO88379 1555 aa14.38□□□□□ -0.11
Cpsf6-208ENSMUST00000177145 Cc2d2aQ8CFW7 1633 aa14.35□□□□□ -0.11
Cpsf6-208ENSMUST00000177145 Fam135aQ6NS59 1506 aa14.34□□□□□ -0.11
Cpsf6-208ENSMUST00000177145 Rhox8Q6VSS7 320 aa14.31□□□□□ -0.12
Cpsf6-208ENSMUST00000177145 Baz1bQ9Z277 1479 aa14.25□□□□□ -0.13
Cpsf6-208ENSMUST00000177145 Smarca2Q6DIC0 1577 aa14.22□□□□□ -0.13
Cpsf6-208ENSMUST00000177145 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
Cpsf6-208ENSMUST00000177145 Wdr62Q3U3T8 1523 aa14.12□□□□□ -0.15
Cpsf6-208ENSMUST00000177145 Iqgap2Q3UQ44 1575 aa14.11□□□□□ -0.15
Cpsf6-208ENSMUST00000177145 Ercc6F8VPZ5 1481 aa14.1□□□□□ -0.15
Cpsf6-208ENSMUST00000177145 Frmpd1A2AKB4 1549 aa14.05□□□□□ -0.16
Cpsf6-208ENSMUST00000177145 Unc13aQ4KUS2 1712 aa14.03□□□□□ -0.16
Cpsf6-208ENSMUST00000177145 Ehmt2Q9Z148 1263 aaKnown RBP14.02□□□□□ -0.17
Cpsf6-208ENSMUST00000177145 Cecr2E9Q2Z1 1453 aa13.97□□□□□ -0.17
Cpsf6-208ENSMUST00000177145 Phldb1Q6PDH0 1371 aaKnown RBP13.92□□□□□ -0.18
Cpsf6-208ENSMUST00000177145 Zcchc6Q5BLK4 1491 aaKnown RBP13.89□□□□□ -0.19
Cpsf6-208ENSMUST00000177145 Dnajc5P60904 198 aa13.83□□□□□ -0.19
Cpsf6-208ENSMUST00000177145 Mrc2Q64449 1479 aa13.8□□□□□ -0.2
Cpsf6-208ENSMUST00000177145 Rpgrip1Q9EPQ2 1331 aa13.76□□□□□ -0.21
Cpsf6-208ENSMUST00000177145 Cttnbp2B9EJA2 1648 aa13.64□□□□□ -0.23
Cpsf6-208ENSMUST00000177145 Lrriq1Q0P5X1 1673 aa13.63□□□□□ -0.23
Cpsf6-208ENSMUST00000177145 CftrP26361 1476 aa13.59□□□□□ -0.23
Cpsf6-208ENSMUST00000177145 Ubl4bQ9CQ84 188 aa13.56□□□□□ -0.24
Cpsf6-208ENSMUST00000177145 Synj1Q8CHC4 1574 aa13.54□□□□□ -0.24
Cpsf6-208ENSMUST00000177145 Shroom2A2ALU4 1481 aa13.5□□□□□ -0.25
Cpsf6-208ENSMUST00000177145 Rsf1E9PWW9 1441 aaKnown RBP13.48□□□□□ -0.25
Cpsf6-208ENSMUST00000177145 Eif4g3Q80XI3 1579 aaKnown RBP13.48□□□□□ -0.25
Cpsf6-208ENSMUST00000177145 Acin1Q9JIX8 1338 aaKnown RBP13.47□□□□□ -0.25
Cpsf6-208ENSMUST00000177145 Kif21aQ9QXL2 1672 aa13.47□□□□□ -0.25
Cpsf6-208ENSMUST00000177145 HrcG5E8J6 738 aa13.43□□□□□ -0.26
Cpsf6-208ENSMUST00000177145 Lamc3Q9R0B6 1581 aa13.38□□□□□ -0.27
Cpsf6-208ENSMUST00000177145 Col17a1Q07563 1470 aa13.34□□□□□ -0.27
Cpsf6-208ENSMUST00000177145 Pcgf6Q99NA9 353 aa13.32□□□□□ -0.28
Cpsf6-208ENSMUST00000177145 Brd4Q9ESU6 1400 aaKnown RBP13.31□□□□□ -0.28
Cpsf6-208ENSMUST00000177145 Cux2P70298 1426 aa13.3□□□□□ -0.28
Cpsf6-208ENSMUST00000177145 Ccdc136Q3TVA9 1136 aa13.23□□□□□ -0.29
Cpsf6-208ENSMUST00000177145 TnnQ80Z71 1560 aa13.22□□□□□ -0.29
Cpsf6-208ENSMUST00000177145 Urb2E9Q7L1 1524 aaKnown RBP13.2□□□□□ -0.3
Cpsf6-208ENSMUST00000177145 Trim41Q5NCC3 630 aa13.2□□□□□ -0.3
Cpsf6-208ENSMUST00000177145 Zcchc11B2RX14 1644 aaKnown RBP13.18□□□□□ -0.3
Cpsf6-208ENSMUST00000177145 Kif15Q6P9L6 1387 aa13.15□□□□□ -0.31
Cpsf6-208ENSMUST00000177145 Zeb1Q64318 1117 aa13.14□□□□□ -0.31
Cpsf6-208ENSMUST00000177145 Top2bQ64511 1612 aa13.13□□□□□ -0.31
Cpsf6-208ENSMUST00000177145 Rusc2Q80U22 1514 aa13.1□□□□□ -0.31
Cpsf6-208ENSMUST00000177145 Plb1Q3TTY0 1478 aa13.08□□□□□ -0.32
Cpsf6-208ENSMUST00000177145 Crocc2F6XLV1 1638 aa13.05□□□□□ -0.32
Cpsf6-208ENSMUST00000177145 Supt5hO55201 1082 aaKnown RBP13.03□□□□□ -0.32
Cpsf6-208ENSMUST00000177145 Camsap1A2AHC3 1581 aa13.02□□□□□ -0.32
Cpsf6-208ENSMUST00000177145 Cep164Q5DU05 1446 aa13.02□□□□□ -0.32
Cpsf6-208ENSMUST00000177145 Setd1bQ8CFT2 1985 aa13.01□□□□□ -0.33
Cpsf6-208ENSMUST00000177145 Las1lA2BE28 776 aaKnown RBP13.01□□□□□ -0.33
Cpsf6-208ENSMUST00000177145 Gpatch8A2A6A1 1505 aa13□□□□□ -0.33
Cpsf6-208ENSMUST00000177145 Dhx29Q6PGC1 1365 aaKnown RBP13□□□□□ -0.33
Cpsf6-208ENSMUST00000177145 Ift140E9PY46 1464 aa12.99□□□□□ -0.33
Cpsf6-208ENSMUST00000177145 Pbrm1Q8BSQ9 1634 aaKnown RBP12.95□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 LrpprcQ6PB66 1392 aaKnown RBP12.94□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 PogzQ8BZH4 1409 aaKnown RBP12.93□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 Pabpn1Q8CCS6 302 aaKnown RBP12.92□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 Disp1Q3TDN0 1521 aa12.9□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 Ube2uB1AUC4 352 aa12.9□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 Neurod1Q60867 357 aa12.9□□□□□ -0.34
Cpsf6-208ENSMUST00000177145 Nup160Q9Z0W3 1402 aaKnown RBP12.89□□□□□ -0.35
Cpsf6-208ENSMUST00000177145 Ccdc18Q640L5 1455 aa12.88□□□□□ -0.35
Cpsf6-208ENSMUST00000177145 Npm1Q61937 292 aaKnown RBP12.87□□□□□ -0.35
Cpsf6-208ENSMUST00000177145 Arhgef5E9Q7D5 1581 aa12.87□□□□□ -0.35
Cpsf6-208ENSMUST00000177145 Golga3P55937 1487 aa12.83□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Duox2A2AQ99 1517 aa12.81□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Samd9lQ69Z37 1561 aa12.81□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Wdr66E9Q743 1299 aa12.8□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Gm38655A0A286YDK6 273 aa12.79□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Adgrl3Q80TS3 1537 aa12.79□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Ttbk1Q6PCN3 1308 aa12.79□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Ppargc1bQ8VHJ7 1014 aa12.78□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Cep170Q6A065 1588 aa12.77□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Cc2d2bA0A286YDU8 1405 aa12.77□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Pprc1Q6NZN1 1644 aa12.77□□□□□ -0.36
Cpsf6-208ENSMUST00000177145 Grin2bQ01097 1482 aa12.77□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 Cngb1E1AZ71 1325 aa12.74□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 Magi3Q9EQJ9 1476 aa12.73□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 PtprtQ99M80 1454 aa12.73□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 Esf1Q3V1V3 845 aaKnown RBP12.73□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 Pcdh10E9PXQ7 1057 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms