RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Ptpn23Q6PB44 1692 aa18.51■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Trpm3Q5F4S9 1721 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Eya1P97767 591 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 1700019A02RikA0A087WPV9 146 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Hspa1lP16627 641 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Cgnl1Q6AW69 1298 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 CarsQ9ER72 831 aaKnown RBP18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Frmpd2A0A140LI67 1392 aa18.5■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Bcl9Q9D219 1425 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Prim1P20664 417 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Phf23Q8BSN5 401 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Aldh1l2Q8K009 923 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Wdr63B2RY71 923 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Snap23O09044 210 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Ggnbp2Q5SV77 696 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Rab11fip3Q8CHD8 1047 aa18.49■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Rtf1A2AQ19 715 aaKnown RBP18.48■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Cabp4Q8VHC5 271 aa18.47■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Ap3b2Q9JME5 1082 aa18.47■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Gm21190A0A0G2JGJ6 266 aa18.46■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Eif4g2Q62448 906 aaKnown RBP18.46■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 C3P01027 1663 aa18.46■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Tmem94Q7TSH8 1360 aa18.46■□□□□ 0.55
Cpsf6-207ENSMUST00000176686 Pibf1E9Q6K3 756 aa18.45■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Tm6sf1P58749 370 aa18.45■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Ccne1Q61457 408 aa18.45■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Slc35g1Q8BY79 368 aa18.45■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Msh6P54276 1358 aaKnown RBP18.44■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Ahnak2E9PYB0 1738 aaKnown RBP18.44■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Fgd1P52734 960 aa18.44■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Aldh8a1Q8BH00 487 aa18.44■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Triml2E9PW10 424 aa18.43■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Hoxc9P09633 260 aa18.43■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Gcc1Q9D4H2 778 aa18.42■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Rad17Q6NXW6 688 aa18.42■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Catsper2A2ARP9 588 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Gm10093D3YYI8 482 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Hdac1O09106 482 aaKnown RBP18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Tbc1d9Q3UYK3 1264 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Fam13aQ8BGI4 693 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 GphnQ8BUV3 769 aaKnown RBP18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Arfgef2A2A5R2 1792 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Terf2O35144 541 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 FanclQ9CR14 375 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Nek4Q9Z1J2 792 aa18.41■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Sipa1l2Q80TE4 1722 aa18.4■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Igsf1Q7TQA1 1317 aa18.4■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Mcm2P97310 904 aa18.4■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Ano8Q6PB70 1060 aa18.39■□□□□ 0.54
Cpsf6-207ENSMUST00000176686 Ccdc146E9Q9F7 977 aa18.39■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Sv2bQ8BG39 683 aa18.39■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Antxr1Q9CZ52 562 aa18.39■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Gli3Q61602 1583 aa18.39■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Prkar2bP31324 416 aa18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Tmem132eQ6IEE6 982 aa18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Foxp4Q9DBY0 795 aaKnown RBP18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Irx3P81067 507 aa18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Robo1O89026 1612 aa18.38■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Thsd7aQ69ZU6 1645 aa18.37■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Col14a1Q80X19 1797 aa18.37■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Scaf1Q5U4C3 1256 aaKnown RBP18.36■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 HypkQ9CR41 129 aa18.36■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 CenppQ9CZ92 286 aa18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Ncapd2Q8K2Z4 1392 aa18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Nfat5Q9WV30 1534 aa18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Q3TQI7 289 aaKnown RBP18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Fam83gQ5SWY7 812 aa18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 GorabQ8BRM2 368 aa18.35■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Myo5bP21271 1818 aa18.34■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Anapc15-psA0A140T8L6 141 aa18.34■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Tmem2Q5FWI3 1383 aa18.34■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Tfip11Q9ERA6 838 aaKnown RBP18.34■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Cyp2d12Q8BVD2 504 aa18.33■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Smarca5Q91ZW3 1051 aaKnown RBP18.33■□□□□ 0.53
Cpsf6-207ENSMUST00000176686 Rimbp3Q3V0F0 1606 aa18.33■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Nsfl1cQ9CZ44 370 aaKnown RBP18.33■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Gsdma3Q5Y4Y6 464 aa18.32■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Tns3Q5SSZ5 1440 aa18.32■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Phlpp1Q8CHE4 1687 aa18.32■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Atf5O70191 283 aa18.31■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Nup153E9Q3G8 1462 aaKnown RBP18.31■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Pnpla7A2AJ88 1352 aa18.31■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Atg4a-psA0A0G2JFS9 396 aa18.31■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Atg4aQ8C9S8 396 aa18.31■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Ncoa4Q5U4H9 625 aa18.3■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Rfx1P48377 963 aa18.29■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Rsph3aQ3UFY4 516 aa18.29■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Dlg5E9Q9R9 1921 aa18.29■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Gnai2P08752 355 aaKnown RBP18.29■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Ppp6r3Q922D4 844 aa18.29■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 1700010I14RikQ7TPG0 532 aa18.28■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Kdm4cQ8VCD7 1054 aa18.28■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Cyp46a1Q9WVK8 500 aa18.28■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 ScaperF8VQ70 1398 aaKnown RBP18.28■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Chpf2Q3UU43 768 aa18.27■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Pdia3P27773 505 aaKnown RBP18.27■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Ppip5k2Q6ZQB6 1129 aa18.27■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Amotl2Q8K371 772 aa18.27■□□□□ 0.52
Cpsf6-207ENSMUST00000176686 Bcl11bQ99PV8 884 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms