RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Gm21680A0A0G2JGR8 267 aa12.88□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Neurod1Q60867 357 aa12.88□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Camkk2Q8C078 588 aa12.88□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Upf1Q9EPU0 1124 aaKnown RBP12.88□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Akap2O54931 893 aa12.87□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 FktnQ8R507 461 aa12.87□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Fam50bQ9WTJ8 334 aa12.87□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Tns2Q8CGB6 1400 aa12.87□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Tgfb2P27090 414 aa12.86□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Cnga1P29974 684 aa12.85□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Stxbp5lQ5DQR4 1185 aa12.85□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 ClspnQ80YR7 1315 aa12.85□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Shank3Q4ACU6 1730 aa12.85□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Gm10471E9Q1C7 252 aa12.84□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Bicdl1A0JNT9 577 aa12.83□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Cdk12Q14AX6 1484 aaKnown RBP12.83□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Col15a1O35206 1367 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Nkx1-1G3UXB3 402 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Mex3cQ05A36 652 aaKnown RBP12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Scaf1Q5U4C3 1256 aaKnown RBP12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 TrhQ62361 256 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Gja3Q64448 417 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Sumf1Q8R0F3 372 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Taf1dQ9D4V4 322 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Speer4bQ9D9F7 267 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Sall2Q9QX96 1004 aa12.82□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Kiaa1107Q80TK0 1369 aa12.81□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 NogP97466 232 aa12.81□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 ApobrQ8VBT6 942 aa12.81□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 FocadA2AKG8 1798 aa12.8□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Ppp1r1bQ60829 194 aa12.8□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 InsrP15208 1372 aa12.8□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Casz1Q9CWL2 1761 aa12.79□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Cyp2c68K7N6C2 491 aa12.79□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Cyp2c67Q569X9 491 aa12.79□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Ahnak2E9PYB0 1738 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Sned1Q70E20 1403 aa12.79□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Wdr66E9Q743 1299 aa12.78□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Fbxo33Q8VE08 562 aa12.78□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Pde3aQ9Z0X4 1141 aa12.78□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Abca3Q8R420 1704 aa12.78□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 CemipQ8BI06 1361 aa12.78□□□□□ -0.36
Ccdc28a-205ENSMUST00000174592 Hoxc9P09633 260 aa12.77□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 PgfP49764 158 aa12.77□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Klhdc4Q921I2 584 aa12.77□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 SobpQ0P5V2 864 aa12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Foxd1Q61345 456 aa12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Col26a1Q91VF6 440 aa12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Aebp2Q9Z248 504 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 CoblQ5NBX1 1337 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 ScaperF8VQ70 1398 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Rbm46P86049 533 aa12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Aplp2Q06335 707 aa12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Adgrb1Q3UHD1 1582 aa12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Eid3Q3V124 375 aa12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Ccnl1Q52KE7 532 aaKnown RBP12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 4930572O03RikQ8C5Y0 211 aa12.75□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Chd4Q6PDQ2 1915 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Megf6Q80V70 1572 aa12.74□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Spata31d1bE9QA57 1361 aa12.74□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 WasP70315 520 aa12.74□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Cfap70D3YVL2 1141 aa12.73□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 PappaQ8R4K8 1624 aa12.73□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Map2P20357 1828 aa12.72□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Ccne1Q61457 408 aa12.72□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Larp1Q6ZQ58 1072 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Ubr1O70481 1757 aa12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Gm13023A2A8N2 498 aa12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Hspa5P20029 655 aaKnown RBP12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Nedd4P46935 887 aaKnown RBP12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 B4galnt4Q766D5 1034 aa12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 ThemisQ8BGW0 636 aa12.71□□□□□ -0.37
Ccdc28a-205ENSMUST00000174592 Smarcc1P97496 1104 aa12.7□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 CpzQ8R4V4 654 aa12.7□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Usp19Q3UJD6 1360 aa12.69□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Birc3O08863 600 aa12.68□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Fam83gQ5SWY7 812 aa12.68□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Hdac6Q9Z2V5 1149 aa12.67□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Rock2P70336 1388 aa12.67□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Dusp27Q148W8 1138 aa12.66□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 RtcbQ99LF4 505 aaKnown RBP12.66□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Pik3ap1Q9EQ32 811 aa12.66□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Plch1Q4KWH5 1682 aa12.66□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Scn7aB1AYL1 1681 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Gm21663A0A0G2JE01 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Gm7361D3Z6R1 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 5031410I06RikE9Q4E0 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Gm1979E9QAN3 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Gm5862K7N5V5 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Gm10220K7N660 267 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 Simc1E9Q6E9 1354 aa12.65□□□□□ -0.38
Ccdc28a-205ENSMUST00000174592 1810065E05RikQ5NC41 235 aa12.64□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Eif3bQ8JZQ9 803 aaKnown RBP12.64□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Msh6P54276 1358 aaKnown RBP12.64□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Tlr8P58682 1032 aa12.63□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Ppp1r37Q8BKR5 712 aa12.63□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Rgs19Q9CX84 216 aa12.63□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Rundc1Q0VDN7 615 aa12.62□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Rad17Q6NXW6 688 aa12.62□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Jmjd4Q8BFT6 427 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms