RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Atg4a-psA0A0G2JFS9 396 aa21.36■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Atg4aQ8C9S8 396 aa21.36■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Aldh1l2Q8K009 923 aa21.36■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Eif4a2P10630 407 aa21.36■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Bcar3Q9QZK2 820 aa21.35■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Zdhhc9P59268 364 aa21.35■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Spef2Q8C9J3 1734 aa21.35■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Kif13aQ9EQW7 1749 aa21.34■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Gm9992B2RWK3 458 aa21.34■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Unc93aQ710D3 458 aa21.34■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Plekhg1F6S200 1446 aa21.34■■□□□ 1.01
Ckap4-202ENSMUST00000167671 ImpactO55091 318 aa21.33■■□□□ 1.01
Ckap4-202ENSMUST00000167671 Chl1P70232 1209 aa21.33■■□□□ 1.01
Ckap4-202ENSMUST00000167671 4931400O07RikQ9D4M5 137 aa21.33■■□□□ 1
Ckap4-202ENSMUST00000167671 Erc2Q6PH08 957 aa21.32■■□□□ 1
Ckap4-202ENSMUST00000167671 Prune1Q8BIW1 454 aa21.32■■□□□ 1
Ckap4-202ENSMUST00000167671 Elp1Q7TT37 1333 aaKnown RBP21.32■■□□□ 1
Ckap4-202ENSMUST00000167671 Zkscan16A2ALW2 728 aa21.31■■□□□ 1
Ckap4-202ENSMUST00000167671 NgefQ8CHT1 710 aa21.31■■□□□ 1
Ckap4-202ENSMUST00000167671 Rbm10Q99KG3 930 aaKnown RBP21.31■■□□□ 1
Ckap4-202ENSMUST00000167671 Prim1P20664 417 aa21.3■■□□□ 1
Ckap4-202ENSMUST00000167671 Syce3B5KM66 88 aa21.3■■□□□ 1
Ckap4-202ENSMUST00000167671 Gadd45bP22339 160 aa21.3■■□□□ 1
Ckap4-202ENSMUST00000167671 Psme1P97371 249 aa21.29■■□□□ 1
Ckap4-202ENSMUST00000167671 Rbm27Q5SFM8 1060 aaKnown RBP21.29■■□□□ 1
Ckap4-202ENSMUST00000167671 Mdc1Q5PSV9 1707 aa21.29■■□□□ 1
Ckap4-202ENSMUST00000167671 Rnf214Q8BFU3 668 aaKnown RBP21.29■■□□□ 1
Ckap4-202ENSMUST00000167671 Phactr2B1AVP0 632 aa21.28■■□□□ 1
Ckap4-202ENSMUST00000167671 Snap23O09044 210 aa21.28■■□□□ 1
Ckap4-202ENSMUST00000167671 TmpoQ61033 693 aaKnown RBP21.28■■□□□ 1
Ckap4-202ENSMUST00000167671 Nwd1A6H603 1563 aa21.28■■□□□ 1
Ckap4-202ENSMUST00000167671 Hmox1P14901 289 aa21.28■■□□□ 1
Ckap4-202ENSMUST00000167671 Sv2bQ8BG39 683 aa21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 Kif20bQ80WE4 1774 aaKnown RBP21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 PplQ9R269 1755 aa21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 Pdia4P08003 638 aaKnown RBP21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 Clcn1Q64347 994 aa21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 Txndc2Q6P902 515 aa21.27■■□□□ 1
Ckap4-202ENSMUST00000167671 Erbb4Q61527 1308 aa21.27■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Hsp90b1P08113 802 aaKnown RBP21.26■□□□□ 0.99
Ckap4-202ENSMUST00000167671 NexnQ7TPW1 607 aa21.26■□□□□ 0.99
Ckap4-202ENSMUST00000167671 NpatQ8BMA5 1420 aa21.26■□□□□ 0.99
Ckap4-202ENSMUST00000167671 VgfQ0VGU4 617 aa21.26■□□□□ 0.99
Ckap4-202ENSMUST00000167671 4930407I10RikD3Z5T8 1512 aa21.26■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Cpa2Q504N0 417 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Gm156Q58A37 223 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Tshz3Q8CGV9 1081 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Pank2Q3U4S0 443 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Chd4Q6PDQ2 1915 aaKnown RBP21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Srgap3Q812A2 1099 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 RestQ8VIG1 1082 aa21.25■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Tpm2P58774 284 aa21.24■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Mrps27Q8BK72 415 aaKnown RBP21.24■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Pabpn1Q8CCS6 302 aaKnown RBP21.24■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Fam83gQ5SWY7 812 aa21.24■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Itsn1Q9Z0R4 1714 aa21.23■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Kif1aP33173 1695 aa21.23■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Phf23Q8BSN5 401 aa21.23■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Ush1cQ9ES64 910 aa21.23■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Rtf1A2AQ19 715 aaKnown RBP21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 CatipB9EKE5 520 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Zfp777B9EKF4 885 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Ptpdc1Q6NZK8 747 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Zkscan2G3X952 960 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Ppp1r42Q8R1Z4 357 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Nphp1Q9QY53 687 aa21.22■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Fez1Q8K0X8 392 aa21.21■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Nol12Q8BG17 217 aa21.21■□□□□ 0.99
Ckap4-202ENSMUST00000167671 PtmsQ9D0J8 101 aaKnown RBP21.21■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Ercc6l2Q9JIM3 1537 aa21.21■□□□□ 0.99
Ckap4-202ENSMUST00000167671 Vwa3bJ9JI28 736 aa21.2■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gnai2P08752 355 aaKnown RBP21.2■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gripap1Q8VD04 806 aa21.2■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Hoxb7P09024 217 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Filip1lQ6P6L0 1131 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Ripk4Q9ERK0 786 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Irx6Q9ER75 438 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Rcan3Q9JKK0 239 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 PtpruB1AUH1 1446 aa21.19■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Q3TQI7 289 aaKnown RBP21.18■□□□□ 0.98
Ckap4-202ENSMUST00000167671 HnrnpmQ9D0E1 729 aaKnown RBP21.18■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Kif4P33174 1231 aa21.18■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gm45015A0A140LII9 184 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gm18336A0A140LIU8 765 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Zscan25B2RX31 543 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Tnnt1O88346 262 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Becn1O88597 448 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 EvcP57680 1005 aa21.17■□□□□ 0.98
Ckap4-202ENSMUST00000167671 MccE9PWI3 1003 aa21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Cwc27Q3TKY6 469 aa21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Mum1Q6DID5 682 aa21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gemin5Q8BX17 1502 aaKnown RBP21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Nol11Q8BJW5 723 aaKnown RBP21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Mknk2Q8CDB0 459 aa21.16■□□□□ 0.98
Ckap4-202ENSMUST00000167671 ScaperF8VQ70 1398 aaKnown RBP21.15■□□□□ 0.98
Ckap4-202ENSMUST00000167671 IghaA0A0A6YXW6 389 aa21.15■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Jakmip1Q8BVL9 626 aa21.15■□□□□ 0.98
Ckap4-202ENSMUST00000167671 LlphQ9D945 130 aaKnown RBP21.15■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.15■□□□□ 0.98
Ckap4-202ENSMUST00000167671 Gzf1Q4VBD9 706 aa21.15■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms