RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Hfm1D3Z4R1 1434 aa13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Cdk19Q8BWD8 501 aa13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Rcan3Q9JKK0 239 aa13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Adgrl1Q80TR1 1466 aa13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Phactr2B1AVP0 632 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Speer4f2E9Q366 295 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 ImpactO55091 318 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Uggt1Q6P5E4 1551 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Kiaa0556Q8C753 1610 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Fez1Q8K0X8 392 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Q9D9H8 365 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Atp2b2Q9R0K7 1198 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Nos1Q9Z0J4 1429 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Gsto1O09131 240 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Fam13aQ8BGI4 693 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 E4f1Q8CCE9 783 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Abca8aQ8K442 1620 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 DnmbpQ6TXD4 1580 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Skint5A7XUY5 1461 aa13.97□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Utp14aQ640M1 767 aaKnown RBP13.96□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Fndc1E9Q043 1732 aa13.96□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Depdc5P61460 1591 aa13.96□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 AglF8VPN4 1532 aa13.96□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Tshz3Q8CGV9 1081 aa13.96□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Chd1lQ9CXF7 900 aa13.96□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Ciz1Q8VEH2 845 aa13.95□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Bcar3Q9QZK2 820 aa13.95□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Adgrb3Q80ZF8 1522 aa13.95□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Gnai1B2RSH2 354 aa13.95□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Gnai3Q9DC51 354 aa13.95□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Erich4Q3UNU4 136 aa13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Zkscan16A2ALW2 728 aa13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 MycnP03966 462 aaKnown RBP13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Cbx1P83917 185 aaKnown RBP13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Naa30Q8CES0 364 aa13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Tmem131lQ3U3D7 1597 aa13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 PaskQ8CEE6 1383 aa13.94□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Trpm1Q2TV84 1622 aa13.93□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Hecw2Q6I6G8 1578 aa13.93□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Anapc15-psA0A140T8L6 141 aa13.93□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Prkar2bP31324 416 aa13.93□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Gripap1Q8VD04 806 aa13.93□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Prex1Q69ZK0 1650 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Atg4a-psA0A0G2JFS9 396 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Cgnl1Q6AW69 1298 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Aldh8a1Q8BH00 487 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Atg4aQ8C9S8 396 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 HnrnpuQ8VEK3 800 aaKnown RBP13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Med14A2ABV5 1459 aaKnown RBP13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Znf518aB2RRF6 1478 aaKnown RBP13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Dnajc5P60904 198 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Serpina10Q8R121 448 aa13.92□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Pdcl2Q78Y63 240 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Olfml1Q8BSH2 233 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Slc52a2Q9D8F3 450 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Bach1P97302 739 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 NexnQ7TPW1 607 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Sipa1l1Q8C0T5 1782 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 MaddQ80U28 1577 aa13.91□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Arhgap4B1AUY3 965 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Mindy4Q3UQI9 744 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Fchsd2Q3USJ8 740 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Gcc1Q9D4H2 778 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Cyp46a1Q9WVK8 500 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Uhrf1bp1B2KF50 1429 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Nrxn1Q9CS84 1514 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Rab11fip3Q8CHD8 1047 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Kif24Q6NWW5 1356 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 1700017N19RikA0A087WPJ1 469 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 MpripP97434 1024 aa13.9□□□□□ -0.18
Prpf40b-208ENSMUST00000136980 Ehbp1l1Q99MS7 1716 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Kif4P33174 1231 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Pcmtd1P59913 357 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Babam1Q3UI43 333 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Mrvi1Q9WUX5 899 aaKnown RBP13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Mdc1Q5PSV9 1707 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Ggnbp2Q5SV77 696 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Erc2Q6PH08 957 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Ercc6lQ8BHK9 1240 aa13.89□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Hsp90b1P08113 802 aaKnown RBP13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Hmox1P14901 289 aa13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Trim28Q62318 834 aa13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Cep170bQ80U49 1574 aa13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Uhrf1bp1lA2RSJ4 1457 aa13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Kcnj4P52189 445 aa13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 MarsQ68FL6 902 aaKnown RBP13.88□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Ptch1Q61115 1434 aa13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Plxnc1Q9QZC2 1574 aa13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 AdgbG3UZ78 1657 aa13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 MsnP26041 577 aaKnown RBP13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Bms1Q6PGF5 1284 aaKnown RBP13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Mum1Q6DID5 682 aa13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Gtpbp4Q99ME9 634 aaKnown RBP13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Ino80Q6ZPV2 1559 aa13.87□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 EvcP57680 1005 aa13.86□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Nol11Q8BJW5 723 aaKnown RBP13.86□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Gm45015A0A140LII9 184 aa13.86□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Gm18336A0A140LIU8 765 aa13.86□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Snap23O09044 210 aa13.86□□□□□ -0.19
Prpf40b-208ENSMUST00000136980 Kdm4aQ8BW72 1064 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms