RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 U2af1Q9D883 239 aaKnown RBP18.79■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Zfp777B9EKF4 885 aa18.78■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Yy1Q00899 414 aa18.78■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Ubxn2bQ0KL01 331 aa18.78■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Vars2Q3U2A8 1060 aa18.78■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Speer4bQ9D9F7 267 aa18.78■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Elp1Q7TT37 1333 aaKnown RBP18.77■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Ppef1O35655 650 aa18.77■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Larp1Q6ZQ58 1072 aaKnown RBP18.77■□□□□ 0.6
Ccdc171-204ENSMUST00000126429 Zcwpw1Q6IR42 630 aa18.76■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Bsdc1Q80Y55 427 aa18.76■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Tcerg1Q8CGF7 1100 aaKnown RBP18.76■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Ppfibp2O35711 882 aa18.75■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Gsdma3Q5Y4Y6 464 aa18.75■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 HypkQ9CR41 129 aa18.75■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Snapc4Q8BP86 1333 aa18.75■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Tns2Q8CGB6 1400 aa18.73■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Amotl1Q9D4H4 968 aa18.73■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Atf7ipQ7TT18 1306 aa18.73■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Ahnak2E9PYB0 1738 aaKnown RBP18.72■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Kcnq2Q9Z351 759 aa18.72■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Fchsd2Q3USJ8 740 aa18.71■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Q4VA45 678 aa18.71■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Pnpla7A2AJ88 1352 aa18.71■□□□□ 0.59
Ccdc171-204ENSMUST00000126429 Stk31Q99MW1 1018 aa18.7■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Erbb3Q61526 1339 aa18.7■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Pdzd9Q9D9M4 266 aa18.69■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Phkg2Q9DB30 406 aa18.69■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Aox2Q5SGK3 1345 aa18.69■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 TmpoQ61033 693 aaKnown RBP18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Afg3l2Q8JZQ2 802 aaKnown RBP18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Eif3bQ8JZQ9 803 aaKnown RBP18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Chrna2Q91X60 512 aa18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Cabp2Q9JLK4 216 aa18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Spef2Q8C9J3 1734 aa18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Asic4Q7TNS7 539 aa18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Rab11fip3Q8CHD8 1047 aa18.68■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Arfgef2A2A5R2 1792 aa18.67■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Arhgap33Q80YF9 1305 aa18.67■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Apaf1O88879 1249 aa18.67■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Nkx2-3P97334 362 aa18.67■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Ssfa2Q922B9 1252 aa18.67■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Gm21663A0A0G2JE01 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Gm7361D3Z6R1 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 5031410I06RikE9Q4E0 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Gm1979E9QAN3 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Gm5862K7N5V5 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Gm10220K7N660 267 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Snap23O09044 210 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Pim2Q62070 370 aa18.66■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Mrs2Q5NCE8 434 aa18.65■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 ApobrQ8VBT6 942 aa18.65■□□□□ 0.58
Ccdc171-204ENSMUST00000126429 Zscan21Q07231 555 aa18.64■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Slc5a1Q8C3K6 665 aa18.64■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Ints5Q8CHT3 1018 aa18.64■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Esx1O88933 382 aa18.63■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Ccnl1Q52KE7 532 aaKnown RBP18.63■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Rps6ka4Q9Z2B9 773 aa18.63■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Lrp5Q91VN0 1614 aa18.63■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Sos2Q02384 1333 aa18.62■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Iqcf3Q9D498 203 aa18.62■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Slc4a2P13808 1237 aaKnown RBP18.6■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Map4k4P97820 1233 aaKnown RBP18.6■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Nsd3Q6P2L6 1439 aa18.6■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Chmp7Q8R1T1 451 aa18.6■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Golga2Q921M4 999 aa18.59■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Crb1Q8VHS2 1405 aa18.58■□□□□ 0.57
Ccdc171-204ENSMUST00000126429 Kif23E9Q5G3 953 aa18.57■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Q8BT18 775 aa18.57■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Kiaa0319lQ8K135 1048 aa18.57■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Mapk8ip3Q9ESN9 1337 aa18.57■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 PappaQ8R4K8 1624 aa18.57■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Rnf180Q3U827 592 aa18.56■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Ccdc155Q80VJ8 648 aa18.56■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Trpc5Q9QX29 975 aa18.56■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Trpm3Q5F4S9 1721 aa18.56■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Hdac6Q9Z2V5 1149 aa18.55■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 AtrnQ9WU60 1428 aa18.55■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Znf541Q0GGX2 1363 aa18.55■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Ciz1Q8VEH2 845 aa18.55■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Klc3Q91W40 508 aa18.55■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Egfem1Q8C088 590 aa18.54■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Atg3Q9CPX6 314 aa18.54■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Shank3Q4ACU6 1730 aa18.53■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Cavin4A2AMM0 362 aa18.53■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Supt5hO55201 1082 aaKnown RBP18.53■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Uspl1Q3ULM6 1089 aa18.53■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Usp19Q3UJD6 1360 aa18.52■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Abcc12Q80WJ6 1366 aa18.52■□□□□ 0.56
Ccdc171-204ENSMUST00000126429 Hirip3Q8BLH7 601 aa18.52■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Rtf1A2AQ19 715 aaKnown RBP18.51■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Dusp27Q148W8 1138 aa18.51■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Ankrd13dQ6PD24 605 aa18.51■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Pcgf6Q99NA9 353 aa18.51■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Tjp1P39447 1745 aaKnown RBP18.51■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Swt1Q9DBQ9 907 aa18.5■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Abca3Q8R420 1704 aa18.5■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Sos1Q62245 1319 aa18.5■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Rad23bP54728 416 aa18.49■□□□□ 0.55
Ccdc171-204ENSMUST00000126429 Cap2Q9CYT6 476 aa18.49■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms