RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Speer4f1Q9D5Q6 258 aa12.46□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Vamp4O70480 141 aa12.46□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Crb1Q8VHS2 1405 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Nol11Q8BJW5 723 aaKnown RBP12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Klhdc4Q921I2 584 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Sos1Q62245 1319 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Kdm2bQ6P1G2 1309 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Supt16hQ920B9 1047 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Amotl1Q9D4H4 968 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Mst1rQ62190 1378 aa12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Pdia6Q922R8 440 aaKnown RBP12.45□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Chl1P70232 1209 aa12.44□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Swt1Q9DBQ9 907 aa12.44□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Ubr3Q5U430 1889 aa12.44□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Fmnl2A2APV2 1086 aa12.44□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Cyp2d11P24457 504 aa12.43□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Ssfa2Q922B9 1252 aa12.43□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Prim1P20664 417 aa12.43□□□□□ -0.42
Prpf39-201ENSMUST00000120580 TmpoQ61033 693 aaKnown RBP12.43□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Cdc37l1Q9CZP7 335 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Nlrp6Q91WS2 869 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Ric1Q69ZJ7 1422 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 NrdcQ8BHG1 1161 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Gimap5Q8BWF2 308 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Ints5Q8CHT3 1018 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 TatQ8QZR1 454 aa12.42□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Anp32bQ9EST5 272 aaKnown RBP12.41□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Atf5O70191 283 aa12.41□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Col1a2Q01149 1372 aa12.41□□□□□ -0.42
Prpf39-201ENSMUST00000120580 KarsQ99MN1 595 aaKnown RBP12.4□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Pdzd9Q9D9M4 266 aa12.4□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Arhgef1Q61210 920 aaKnown RBP12.4□□□□□ -0.42
Prpf39-201ENSMUST00000120580 Igfbp6P47880 238 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Stra8P70278 393 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Fnbp4Q6ZQ03 1031 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Lrrc59Q922Q8 307 aaKnown RBP12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Kcnh4A2A5F7 1018 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Larp1Q6ZQ58 1072 aaKnown RBP12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Col11a2Q64739 1736 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 StrcQ8VIM6 1809 aa12.39□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Mrc1Q61830 1456 aa12.38□□□□□ -0.43
Prpf39-201ENSMUST00000120580 ThemisQ8BGW0 636 aa12.38□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Togaram1Q6A070 1776 aaKnown RBP12.38□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Gm21698A0A087WQP8 267 aa12.38□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Gm21671G3UY31 267 aa12.38□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Sema6bO54951 886 aa12.37□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Qtrt2B8ZXI1 415 aa12.37□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.36□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Cavin2Q63918 418 aaKnown RBP12.36□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Rbm25B2RY56 838 aaKnown RBP12.36□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Phkg2Q9DB30 406 aa12.36□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Eif4a1P60843 406 aaKnown RBP12.35□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Ccdc129Q14B48 1034 aa12.35□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Acsbg1Q99PU5 721 aa12.35□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Flt4P35917 1363 aa12.34□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Q3UPC7 1272 aa12.34□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Rad21Q61550 635 aaKnown RBP12.34□□□□□ -0.43
Prpf39-201ENSMUST00000120580 Neurod2Q62414 383 aa12.33□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Stk31Q99MW1 1018 aa12.33□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Rlbp1Q9Z275 317 aa12.33□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Adcy9P51830 1353 aa12.33□□□□□ -0.44
Prpf39-201ENSMUST00000120580 MypopQ8R4U1 393 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 HypkQ9CR41 129 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Itgb4A2A863 1818 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Duxf3A0A0N4SV92 674 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Calr4Q3TQS0 420 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Asic4Q7TNS7 539 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ltn1Q6A009 1767 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ecm2Q5FW85 670 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Tspyl2Q7TQI8 677 aa12.32□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Aifm3Q3TY86 605 aa12.31□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Plekhm2Q80TQ5 1018 aa12.31□□□□□ -0.44
Prpf39-201ENSMUST00000120580 ZgpatQ8VDM1 511 aa12.31□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Phrf1A6H619 1682 aa12.31□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ssc5dQ8BV57 1371 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ccdc171E9Q1U1 1324 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Gnai1B2RSH2 354 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Iqsec3Q3TES0 1195 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Gnai3Q9DC51 354 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Mapk8ip3Q9ESN9 1337 aa12.3□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Tmem119Q8R138 280 aa12.29□□□□□ -0.44
Prpf39-201ENSMUST00000120580 TkfcQ8VC30 578 aa12.29□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Tom1O88746 492 aa12.29□□□□□ -0.44
Prpf39-201ENSMUST00000120580 CoilQ5SU73 570 aa12.29□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Scn11aQ9R053 1765 aa12.28□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ksr2Q3UVC0 959 aa12.28□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Ggnbp2Q5SV77 696 aa12.28□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Gsdma3Q5Y4Y6 464 aa12.28□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Rab11fip3Q8CHD8 1047 aa12.28□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Prkrip1Q9CWV6 186 aaKnown RBP12.27□□□□□ -0.44
Prpf39-201ENSMUST00000120580 Rbbp6P97868 1790 aaKnown RBP12.27□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Disp3A3KFU9 1347 aa12.27□□□□□ -0.45
Prpf39-201ENSMUST00000120580 GakQ99KY4 1305 aa12.27□□□□□ -0.45
Prpf39-201ENSMUST00000120580 4930523C07RikE9Q2T4 99 aa12.26□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Ccar1Q8CH18 1146 aaKnown RBP12.26□□□□□ -0.45
Prpf39-201ENSMUST00000120580 CenpbP27790 599 aa12.26□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Cnksr1A2A9K7 700 aa12.26□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Cfap44E9Q5M6 1843 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Plin1Q8CGN5 517 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Pank1Q8K4K6 548 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 103.2 ms