RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Eif4g2Q62448 906 aaKnown RBP30.03■■■□□ 2.4
Ubp1-203ENSMUST00000116492 PtprvP70289 1705 aa30.03■■■□□ 2.4
Ubp1-203ENSMUST00000116492 1700019A02RikA0A087WPV9 146 aa30.02■■■□□ 2.4
Ubp1-203ENSMUST00000116492 Ggnbp2Q5SV77 696 aa30.02■■■□□ 2.4
Ubp1-203ENSMUST00000116492 4933416C03RikQ3V063 378 aa30.01■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Aifm3Q3TY86 605 aa30.01■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Phf23Q8BSN5 401 aa30.01■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Gcc1Q9D4H2 778 aa30■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Igsf1Q7TQA1 1317 aa30■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Aplp1Q03157 653 aa29.99■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Nckap5lQ6GQX2 1323 aa29.99■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Gm10093D3YYI8 482 aa29.98■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Hdac1O09106 482 aaKnown RBP29.98■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Mcm2P97310 904 aa29.98■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Ano8Q6PB70 1060 aa29.98■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Hoxc9P09633 260 aa29.97■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Prim1P20664 417 aa29.96■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Ccne1Q61457 408 aa29.96■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Tmem94Q7TSH8 1360 aa29.96■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Triml2E9PW10 424 aa29.96■■■□□ 2.39
Ubp1-203ENSMUST00000116492 Tbc1d9Q3UYK3 1264 aa29.95■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Fam13aQ8BGI4 693 aa29.95■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Pibf1E9Q6K3 756 aa29.94■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Terf2O35144 541 aa29.94■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Fgd1P52734 960 aa29.94■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Sv2bQ8BG39 683 aa29.93■■■□□ 2.38
Ubp1-203ENSMUST00000116492 HypkQ9CR41 129 aa29.93■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Ncapd2Q8K2Z4 1392 aa29.92■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Msh6P54276 1358 aaKnown RBP29.92■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Foxp4Q9DBY0 795 aaKnown RBP29.91■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Nek4Q9Z1J2 792 aa29.91■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Prkar2bP31324 416 aa29.9■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Catsper2A2ARP9 588 aa29.9■■■□□ 2.38
Ubp1-203ENSMUST00000116492 CenppQ9CZ92 286 aa29.9■■■□□ 2.38
Ubp1-203ENSMUST00000116492 C3P01027 1663 aa29.9■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Snap23O09044 210 aa29.89■■■□□ 2.38
Ubp1-203ENSMUST00000116492 FanclQ9CR14 375 aa29.89■■■□□ 2.38
Ubp1-203ENSMUST00000116492 Anapc15-psA0A140T8L6 141 aa29.89■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Ccdc146E9Q9F7 977 aa29.87■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Gsdma3Q5Y4Y6 464 aa29.87■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Antxr1Q9CZ52 562 aa29.87■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Arfgef2A2A5R2 1792 aa29.87■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Ahnak2E9PYB0 1738 aaKnown RBP29.85■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Slc35g1Q8BY79 368 aa29.85■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Rimbp3Q3V0F0 1606 aa29.85■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Q3TQI7 289 aaKnown RBP29.84■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.83■■■□□ 2.37
Ubp1-203ENSMUST00000116492 Tmem2Q5FWI3 1383 aa29.82■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Ncoa4Q5U4H9 625 aa29.81■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Col14a1Q80X19 1797 aa29.81■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Atf5O70191 283 aa29.8■■■□□ 2.36
Ubp1-203ENSMUST00000116492 ScaperF8VQ70 1398 aaKnown RBP29.8■■■□□ 2.36
Ubp1-203ENSMUST00000116492 MyclP10166 368 aa29.8■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Tmem132eQ6IEE6 982 aa29.8■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Gimap6Q8K349 305 aa29.8■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Tns3Q5SSZ5 1440 aa29.78■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Fam83gQ5SWY7 812 aa29.78■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Kdm4cQ8VCD7 1054 aa29.78■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Tfip11Q9ERA6 838 aaKnown RBP29.78■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Robo1O89026 1612 aa29.77■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Sipa1l2Q80TE4 1722 aa29.77■■■□□ 2.36
Ubp1-203ENSMUST00000116492 Gnai2P08752 355 aaKnown RBP29.77■■■□□ 2.36
Ubp1-203ENSMUST00000116492 GorabQ8BRM2 368 aa29.76■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Atg4a-psA0A0G2JFS9 396 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Atg4aQ8C9S8 396 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Kdm6aO70546 1401 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Smarca5Q91ZW3 1051 aaKnown RBP29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Amotl1Q9D4H4 968 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Nfat5Q9WV30 1534 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Topaz1E5FYH1 1653 aa29.75■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Irx3P81067 507 aa29.74■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Ppp6r3Q922D4 844 aa29.74■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Cyp46a1Q9WVK8 500 aa29.74■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Thsd7aQ69ZU6 1645 aa29.73■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Myo5bP21271 1818 aa29.73■■■□□ 2.35
Ubp1-203ENSMUST00000116492 1700010I14RikQ7TPG0 532 aa29.73■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Nucb1Q02819 459 aaKnown RBP29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 TatQ8QZR1 454 aa29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Nup153E9Q3G8 1462 aaKnown RBP29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Unc13bQ9Z1N9 1602 aa29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Ppip5k2Q6ZQB6 1129 aa29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Kcnh5Q920E3 988 aa29.72■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Fyb1O35601 819 aa29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Pdia3P27773 505 aaKnown RBP29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Rsph3aQ3UFY4 516 aa29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Stk36Q69ZM6 1316 aa29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Chpf2Q3UU43 768 aa29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 TimelessQ9R1X4 1197 aa29.71■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Pnpla7A2AJ88 1352 aa29.7■■■□□ 2.35
Ubp1-203ENSMUST00000116492 Rfx1P48377 963 aa29.68■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Nsfl1cQ9CZ44 370 aaKnown RBP29.68■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Nphp1Q9QY53 687 aa29.68■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Disp3A3KFU9 1347 aa29.68■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Cyp2d12Q8BVD2 504 aa29.68■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Alpk3Q924C5 1678 aa29.67■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Abcc12Q80WJ6 1366 aa29.67■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Cnksr1A2A9K7 700 aa29.66■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Srgap3Q812A2 1099 aa29.66■■■□□ 2.34
Ubp1-203ENSMUST00000116492 EngaseQ8BX80 734 aa29.66■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Nid2O88322 1403 aa29.66■■■□□ 2.34
Retrieved 100 of 22,080 RNA–protein pairs in 119.8 ms