RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Ttc37F8VPK0 1563 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Gm21190A0A0G2JGJ6 266 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 ImpactO55091 318 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Kif4P33174 1231 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Znf692Q3U381 531 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Srgap3Q812A2 1099 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Eif4a2P10630 407 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Uhrf1bp1lA2RSJ4 1457 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Atp7bQ64446 1462 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Adgrl1Q80TR1 1466 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Aifm3Q3TY86 605 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 NexnQ7TPW1 607 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Ppp6r3Q922D4 844 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Cdc42bpgQ80UW5 1551 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Plekhg1F6S200 1446 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 AnlnQ8K298 1121 aaKnown RBP10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 KinQ8K339 391 aa10.03□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Yeats2Q3TUF7 1407 aa10.02□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Bcar3Q9QZK2 820 aa10.02□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Elp1Q7TT37 1333 aaKnown RBP10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Pcmtd1P59913 357 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ptpdc1Q6NZK8 747 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Tmx3Q8BXZ1 456 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Fez1Q8K0X8 392 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Kiaa0556Q8C753 1610 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Slc4a10Q5DTL9 1118 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 MarsQ68FL6 902 aaKnown RBP10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Rnf214Q8BFU3 668 aaKnown RBP10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Dmrtc1Q9D9R7 182 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ap3b2Q9JME5 1082 aa10.02□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Tm6sf1P58749 370 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Cwc27Q3TKY6 469 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ppp1r42Q8R1Z4 357 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Akap12Q9WTQ5 1684 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Cep170bQ80U49 1574 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Tpm2P58774 284 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 4931400O07RikQ9D4M5 137 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Znf541Q0GGX2 1363 aa10.01□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Rtn4Q99P72 1162 aaKnown RBP10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ino80Q6ZPV2 1559 aa10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Taok2Q6ZQ29 1240 aa10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Mrps27Q8BK72 415 aaKnown RBP10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Pde3bQ61409 1100 aa10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Cyp27a1Q9DBG1 533 aa10□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Dip2cE9PWR4 1557 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Sipa1l1Q8C0T5 1782 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Trpm1Q2TV84 1622 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Syce3B5KM66 88 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Jakmip1Q8BVL9 626 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 HypkQ9CR41 129 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Hecw2Q6I6G8 1578 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Brpf1B2RRD7 1212 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 ScaperF8VQ70 1398 aaKnown RBP9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Kif24Q6NWW5 1356 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ahdc1Q6PAL7 1594 aaKnown RBP9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Atg4a-psA0A0G2JFS9 396 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Q3UJC8 639 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Dennd6aQ8BH65 605 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Atg4aQ8C9S8 396 aa9.99□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Prim1P20664 417 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Chl1P70232 1209 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Nol12Q8BG17 217 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ddit3P35639 168 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Ints3Q7TPD0 1041 aaKnown RBP9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Hoxa7P02830 229 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Fam83gQ5SWY7 812 aa9.98□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Zkscan16A2ALW2 728 aa9.97□□□□□ -0.81
Bdnf-208ENSMUST00000111049 LlphQ9D945 130 aaKnown RBP9.97□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Gdpd2Q9ESM6 539 aa9.97□□□□□ -0.81
Bdnf-208ENSMUST00000111049 PtprmP28828 1452 aa9.97□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Astn2Q80Z10 1352 aa9.97□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Gsdma3Q5Y4Y6 464 aa9.96□□□□□ -0.81
Bdnf-208ENSMUST00000111049 RereQ80TZ9 1558 aa9.96□□□□□ -0.81
Bdnf-208ENSMUST00000111049 Cfdp1O88271 295 aaKnown RBP9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 EvcP57680 1005 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 CalcaP70160 136 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Cpa2Q504N0 417 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Stk3Q9JI10 497 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 AglF8VPN4 1532 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Smc3Q9CW03 1217 aaKnown RBP9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Tceal9Q9DD24 104 aa9.96□□□□□ -0.82
Bdnf-208ENSMUST00000111049 EngaseQ8BX80 734 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 RestQ8VIG1 1082 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Synj2Q9D2G5 1434 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ccne1Q61457 408 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ccdc173A0JLY1 547 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 MecomP14404 1042 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Tshz3Q8CGV9 1081 aa9.95□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Kcnn1Q9EQR3 537 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Rcan3Q9JKK0 239 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 CgnP59242 1191 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Anapc15P60007 132 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Atp8b2P98199 1209 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Pdcl2Q78Y63 240 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Rbm10Q99KG3 930 aaKnown RBP9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 NpatQ8BMA5 1420 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Pdia4P08003 638 aaKnown RBP9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Gadd45bP22339 160 aa9.94□□□□□ -0.82
Bdnf-208ENSMUST00000111049 DmtnQ9WV69 405 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms