RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Kif13aQ9EQW7 1749 aa26,84■■□□□ 1,89
Trim3-202ENSMUST00000106789 Dhx16G3X8X0 1044 aaKnown RBP26,84■■□□□ 1,89
Trim3-202ENSMUST00000106789 CalcaP70160 136 aa26,83■■□□□ 1,89
Trim3-202ENSMUST00000106789 Elp1Q7TT37 1333 aaKnown RBP26,83■■□□□ 1,89
Trim3-202ENSMUST00000106789 Ggnbp2Q5SV77 696 aa26,82■■□□□ 1,88
Trim3-202ENSMUST00000106789 Gdpd2Q9ESM6 539 aa26,82■■□□□ 1,88
Trim3-202ENSMUST00000106789 DmtnQ9WV69 405 aa26,82■■□□□ 1,88
Trim3-202ENSMUST00000106789 ImpactO55091 318 aa26,82■■□□□ 1,88
Trim3-202ENSMUST00000106789 Nwd1A6H603 1563 aa26,81■■□□□ 1,88
Trim3-202ENSMUST00000106789 Zdhhc9P59268 364 aa26,8■■□□□ 1,88
Trim3-202ENSMUST00000106789 Gm156Q58A37 223 aa26,8■■□□□ 1,88
Trim3-202ENSMUST00000106789 Erc2Q6PH08 957 aa26,8■■□□□ 1,88
Trim3-202ENSMUST00000106789 Bcar3Q9QZK2 820 aa26,8■■□□□ 1,88
Trim3-202ENSMUST00000106789 Chmp4cQ9D7F7 232 aa26,79■■□□□ 1,88
Trim3-202ENSMUST00000106789 Pabpn1Q8CCS6 302 aaKnown RBP26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 4931400O07RikQ9D4M5 137 aa26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 PplQ9R269 1755 aa26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 Gm9992B2RWK3 458 aa26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 Taok2Q6ZQ29 1240 aa26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 Unc93aQ710D3 458 aa26,78■■□□□ 1,88
Trim3-202ENSMUST00000106789 Zkscan16A2ALW2 728 aa26,77■■□□□ 1,88
Trim3-202ENSMUST00000106789 Psme1P97371 249 aa26,77■■□□□ 1,88
Trim3-202ENSMUST00000106789 TmpoQ61033 693 aaKnown RBP26,76■■□□□ 1,87
Trim3-202ENSMUST00000106789 Itsn1Q9Z0R4 1714 aa26,75■■□□□ 1,87
Trim3-202ENSMUST00000106789 Hoxb7P09024 217 aa26,75■■□□□ 1,87
Trim3-202ENSMUST00000106789 NpatQ8BMA5 1420 aa26,75■■□□□ 1,87
Trim3-202ENSMUST00000106789 4930407I10RikD3Z5T8 1512 aa26,75■■□□□ 1,87
Trim3-202ENSMUST00000106789 CatipB9EKE5 520 aa26,74■■□□□ 1,87
Trim3-202ENSMUST00000106789 Phf23Q8BSN5 401 aa26,74■■□□□ 1,87
Trim3-202ENSMUST00000106789 Prim1P20664 417 aa26,74■■□□□ 1,87
Trim3-202ENSMUST00000106789 Prune1Q8BIW1 454 aa26,74■■□□□ 1,87
Trim3-202ENSMUST00000106789 Kif1aP33173 1695 aa26,73■■□□□ 1,87
Trim3-202ENSMUST00000106789 Sv2bQ8BG39 683 aa26,73■■□□□ 1,87
Trim3-202ENSMUST00000106789 Clcn1Q64347 994 aa26,73■■□□□ 1,87
Trim3-202ENSMUST00000106789 Txndc2Q6P902 515 aa26,73■■□□□ 1,87
Trim3-202ENSMUST00000106789 Mrps27Q8BK72 415 aaKnown RBP26,73■■□□□ 1,87
Trim3-202ENSMUST00000106789 PtpruB1AUH1 1446 aa26,72■■□□□ 1,87
Trim3-202ENSMUST00000106789 Syce3B5KM66 88 aa26,71■■□□□ 1,87
Trim3-202ENSMUST00000106789 Mdc1Q5PSV9 1707 aa26,71■■□□□ 1,87
Trim3-202ENSMUST00000106789 Gadd45bP22339 160 aa26,71■■□□□ 1,87
Trim3-202ENSMUST00000106789 PtmsQ9D0J8 101 aaKnown RBP26,71■■□□□ 1,87
Trim3-202ENSMUST00000106789 NexnQ7TPW1 607 aa26,71■■□□□ 1,87
Trim3-202ENSMUST00000106789 Kif20bQ80WE4 1774 aaKnown RBP26,7■■□□□ 1,86
Trim3-202ENSMUST00000106789 NgefQ8CHT1 710 aa26,7■■□□□ 1,86
Trim3-202ENSMUST00000106789 Phactr2B1AVP0 632 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Snap23O09044 210 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Hmox1P14901 289 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Chd4Q6PDQ2 1915 aaKnown RBP26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Srgap3Q812A2 1099 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 RestQ8VIG1 1082 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Ercc6l2Q9JIM3 1537 aa26,69■■□□□ 1,86
Trim3-202ENSMUST00000106789 Tpm2P58774 284 aa26,68■■□□□ 1,86
Trim3-202ENSMUST00000106789 VgfQ0VGU4 617 aa26,68■■□□□ 1,86
Trim3-202ENSMUST00000106789 Zfp777B9EKF4 885 aa26,68■■□□□ 1,86
Trim3-202ENSMUST00000106789 Zkscan2G3X952 960 aa26,67■■□□□ 1,86
Trim3-202ENSMUST00000106789 Rtf1A2AQ19 715 aaKnown RBP26,67■■□□□ 1,86
Trim3-202ENSMUST00000106789 Rbm27Q5SFM8 1060 aaKnown RBP26,67■■□□□ 1,86
Trim3-202ENSMUST00000106789 Rnf214Q8BFU3 668 aaKnown RBP26,67■■□□□ 1,86
Trim3-202ENSMUST00000106789 Rsph4aQ8BYM7 716 aa26,67■■□□□ 1,86
Trim3-202ENSMUST00000106789 Hsp90b1P08113 802 aaKnown RBP26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Fam83gQ5SWY7 812 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Fez1Q8K0X8 392 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Rbm10Q99KG3 930 aaKnown RBP26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Nphp1Q9QY53 687 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Vwa3bJ9JI28 736 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Gnai2P08752 355 aaKnown RBP26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Ptpdc1Q6NZK8 747 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Ush1cQ9ES64 910 aa26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 Gemin5Q8BX17 1502 aaKnown RBP26,66■■□□□ 1,86
Trim3-202ENSMUST00000106789 ScaperF8VQ70 1398 aaKnown RBP26,65■■□□□ 1,86
Trim3-202ENSMUST00000106789 Pdia4P08003 638 aaKnown RBP26,65■■□□□ 1,86
Trim3-202ENSMUST00000106789 Ppp1r42Q8R1Z4 357 aa26,65■■□□□ 1,86
Trim3-202ENSMUST00000106789 Erbb4Q61527 1308 aa26,64■■□□□ 1,86
Trim3-202ENSMUST00000106789 Ap3b2Q9JME5 1082 aa26,64■■□□□ 1,85
Trim3-202ENSMUST00000106789 Tshz3Q8CGV9 1081 aa26,63■■□□□ 1,85
Trim3-202ENSMUST00000106789 Cpa2Q504N0 417 aa26,63■■□□□ 1,85
Trim3-202ENSMUST00000106789 Filip1lQ6P6L0 1131 aa26,63■■□□□ 1,85
Trim3-202ENSMUST00000106789 Pank2Q3U4S0 443 aa26,62■■□□□ 1,85
Trim3-202ENSMUST00000106789 HnrnpmQ9D0E1 729 aaKnown RBP26,62■■□□□ 1,85
Trim3-202ENSMUST00000106789 Gripap1Q8VD04 806 aa26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 Gm45015A0A140LII9 184 aa26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 Gm18336A0A140LIU8 765 aa26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 MccE9PWI3 1003 aa26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 Q3TQI7 289 aaKnown RBP26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 Adgrb1Q3UHD1 1582 aa26,61■■□□□ 1,85
Trim3-202ENSMUST00000106789 IghaA0A0A6YXW6 389 aa26,6■■□□□ 1,85
Trim3-202ENSMUST00000106789 LlphQ9D945 130 aaKnown RBP26,6■■□□□ 1,85
Trim3-202ENSMUST00000106789 Kif4P33174 1231 aa26,6■■□□□ 1,85
Trim3-202ENSMUST00000106789 Dip2aQ8BWT5 1523 aa26,59■■□□□ 1,85
Trim3-202ENSMUST00000106789 Rcan3Q9JKK0 239 aa26,59■■□□□ 1,85
Trim3-202ENSMUST00000106789 Pdcl2Q78Y63 240 aa26,59■■□□□ 1,85
Trim3-202ENSMUST00000106789 Becn1O88597 448 aa26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 EvcP57680 1005 aa26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 Mum1Q6DID5 682 aa26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 AnlnQ8K298 1121 aaKnown RBP26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 Ripk4Q9ERK0 786 aa26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 Zc3h13E9Q784 1729 aaKnown RBP26,58■■□□□ 1,85
Trim3-202ENSMUST00000106789 Zscan25B2RX31 543 aa26,57■■□□□ 1,84
Trim3-202ENSMUST00000106789 St18Q80TY4 1045 aa26,57■■□□□ 1,84
Trim3-202ENSMUST00000106789 Cwc27Q3TKY6 469 aa26,57■■□□□ 1,84
Retrieved 100 of 22,080 RNA–protein pairs in 22,5 ms