RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gsdma3Q5Y4Y6 464 aa16.41■□□□□ 0.22
Ccdc28a-202ENSMUST00000080860 Ric1Q69ZJ7 1422 aa16.41■□□□□ 0.22
Ccdc28a-202ENSMUST00000080860 MpripP97434 1024 aa16.4■□□□□ 0.22
Ccdc28a-202ENSMUST00000080860 Gpr150Q8BL07 427 aa16.39■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 HypkQ9CR41 129 aa16.39■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 AtrnQ9WU60 1428 aa16.38■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Aplp2Q06335 707 aa16.38■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Asic4Q7TNS7 539 aa16.38■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 CoblQ5NBX1 1337 aaKnown RBP16.38■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Pdzd9Q9D9M4 266 aa16.37■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Znf541Q0GGX2 1363 aa16.37■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Kiaa1107Q80TK0 1369 aa16.37■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Myo5bP21271 1818 aa16.36■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Fam198bQ3UPI1 517 aa16.36■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Slc5a1Q8C3K6 665 aa16.36■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Rab11fip3Q8CHD8 1047 aa16.36■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Ints5Q8CHT3 1018 aa16.36■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Ccnl1Q52KE7 532 aaKnown RBP16.35■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 ApobrQ8VBT6 942 aa16.35■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 PalmQ9Z0P4 383 aa16.35■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Kif23E9Q5G3 953 aa16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Ankrd13dQ6PD24 605 aa16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Aebp2Q9Z248 504 aaKnown RBP16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Hdac6Q9Z2V5 1149 aa16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 TnikP83510 1323 aa16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Igsf1Q7TQA1 1317 aa16.34■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 Kndc1Q0KK55 1742 aa16.33■□□□□ 0.21
Ccdc28a-202ENSMUST00000080860 ErfeQ6PGN1 340 aa16.33■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Spata31d1bE9QA57 1361 aa16.33■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Msh6P54276 1358 aaKnown RBP16.33■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Atf7ipQ7TT18 1306 aa16.32■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Klc3Q91W40 508 aa16.32■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Trpc5Q9QX29 975 aa16.32■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Zfyve9A2A8R0 1397 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Abcc12Q80WJ6 1366 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Gm21663A0A0G2JE01 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Gm7361D3Z6R1 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 5031410I06RikE9Q4E0 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Gm1979E9QAN3 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Gm5862K7N5V5 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Gm10220K7N660 267 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Mcm10Q0VBD2 885 aa16.31■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.3■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Nkx2-3P97334 362 aa16.3■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Tsen2Q6P7W5 460 aa16.3■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 GsdmaQ9EST1 446 aa16.3■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 C4bP01029 1738 aa16.29■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Fchsd2Q3USJ8 740 aa16.29■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Q4VA45 678 aa16.29■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Atg3Q9CPX6 314 aa16.29■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Ubr3Q5U430 1889 aa16.29■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 En2P09066 324 aa16.28■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Tiam2Q6ZPF3 1715 aa16.28■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Chmp7Q8R1T1 451 aa16.27■□□□□ 0.2
Ccdc28a-202ENSMUST00000080860 Stk31Q99MW1 1018 aa16.26■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Sned1Q70E20 1403 aa16.26■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 MeiocA2AG06 965 aa16.25■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 TmpoQ61033 693 aaKnown RBP16.25■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Sos1Q62245 1319 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Ccdc85cE9Q6B2 420 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Magea1O89006 320 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Magea5O89009 320 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 PsdQ5DTT2 1024 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Ciz1Q8VEH2 845 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Magea2Q9R2A2 320 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Adcy9P51830 1353 aa16.24■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Dcaf5Q80T85 946 aa16.23■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Jmjd4Q8BFT6 427 aa16.23■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Plch1Q4KWH5 1682 aa16.22■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Emilin1Q99K41 1017 aa16.22■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 U2af1Q9D883 239 aaKnown RBP16.22■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Gm13023A2A8N2 498 aa16.21■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 NppbP40753 121 aa16.21■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Q8BT18 775 aa16.21■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Kcnq2Q9Z351 759 aa16.21■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 Usp19Q3UJD6 1360 aa16.21■□□□□ 0.19
Ccdc28a-202ENSMUST00000080860 AceP09470 1312 aa16.2■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Zswim8Q3UHH1 1832 aaKnown RBP16.2■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Q7TT23 1179 aa16.2■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Plin1Q8CGN5 517 aa16.2■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Kcna3P16390 528 aa16.19■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Rpgrip1lQ8CG73 1264 aa16.19■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Nlrp6Q91WS2 869 aa16.19■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Cap2Q9CYT6 476 aa16.19■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Nav1Q8CH77 1875 aa16.18■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Snap23O09044 210 aa16.18■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Prom2Q3UUY6 835 aa16.18■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Iqcf3Q9D498 203 aa16.18■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Col11a2Q64739 1736 aa16.18■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Anp32bQ9EST5 272 aaKnown RBP16.17■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Uhrf1bp1B2KF50 1429 aa16.17■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Mtfr1lQ9CWE0 289 aa16.16■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Cabp2Q9JLK4 216 aa16.16■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Lrp5Q91VN0 1614 aa16.16■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Mylk2Q8VCR8 613 aa16.15■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 IncenpQ9WU62 880 aa16.15■□□□□ 0.18
Ccdc28a-202ENSMUST00000080860 Bicdl1A0JNT9 577 aa16.14■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Jdp2P97875 163 aa16.14■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Pde4dQ01063 747 aa16.14■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Smarcc1P97496 1104 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms