RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Tet3Q8BG87 1668 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Catsper2A2ARP9 588 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Map7O88735 730 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Tnnt2P50752 301 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 FancaQ9JL70 1439 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 4930407I10RikD3Z5T8 1512 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Sirt1Q923E4 737 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Nlgn1Q99K10 843 aa11.92□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Abcc10Q8R4P9 1501 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Cypt1Q8CH20 168 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Cabp4Q8VHC5 271 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 CarsQ9ER72 831 aaKnown RBP11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 D430041D05RikF6ZGR6 1678 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Wdr63B2RY71 923 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Triml2E9PW10 424 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Gm10563F6WIE4 79 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Eya1P97767 591 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Slc35g1Q8BY79 368 aa11.91□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.9□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Chl1P70232 1209 aa11.9□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 FanclQ9CR14 375 aa11.9□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Gm21190A0A0G2JGJ6 266 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 LifrP42703 1092 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Ccne1Q61457 408 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Pdcl2Q78Y63 240 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Dennd6aQ8BH65 605 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Nsfl1cQ9CZ44 370 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Ccdc146E9Q9F7 977 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Cavin2Q63918 418 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 CemipQ8BI06 1361 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Cdk12Q14AX6 1484 aaKnown RBP11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Arap3Q8R5G7 1538 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Sos1Q62245 1319 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Adgrb1Q3UHD1 1582 aa11.89□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Tbc1d9Q3UYK3 1264 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 GorabQ8BRM2 368 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Smarca5Q91ZW3 1051 aaKnown RBP11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Tfip11Q9ERA6 838 aaKnown RBP11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Als2Q920R0 1651 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Gse1Q3U3C9 1213 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Wwc1Q5SXA9 1104 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Tmem132eQ6IEE6 982 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Nek4Q9Z1J2 792 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 C5P06684 1680 aa11.88□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Col16a1Q8BLX7 1580 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Znf335A2A5K6 1337 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Tmem94Q7TSH8 1360 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Spryd3E9Q9B3 442 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Terf2O35144 541 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Antxr1Q9CZ52 562 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 KnstrnQ9D9Z1 312 aaKnown RBP11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Frmpd2A0A140LI67 1392 aa11.87□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 PtprvP70289 1705 aa11.86□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Rfx1P48377 963 aa11.86□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Tshz2Q68FE9 1030 aa11.86□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Fam13aQ8BGI4 693 aa11.86□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Cc2d1aQ8K1A6 943 aa11.86□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Prkar2bP31324 416 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Fam83gQ5SWY7 812 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Dmrtc1Q9D9R7 182 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Scn7aB1AYL1 1681 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Phf23Q8BSN5 401 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Rab11fip3Q8CHD8 1047 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Mon2Q80TL7 1715 aa11.85□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Cetn4Q8K4K1 168 aa11.84□□□□□ -0.51
Cpsf3-201ENSMUST00000067284 Rtf1A2AQ19 715 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Hoxc9P09633 260 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Irf5P56477 497 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Tm6sf1P58749 370 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Ap3b2Q9JME5 1082 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Stk11ipQ3TAA7 1072 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Eif4g2Q62448 906 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Cyp2d12Q8BVD2 504 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Trim44Q9QXA7 346 aa11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Ahnak2E9PYB0 1738 aaKnown RBP11.83□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Gm10093D3YYI8 482 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Hdac1O09106 482 aaKnown RBP11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 MyclP10166 368 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 CalcaP70160 136 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Aldh1l2Q8K009 923 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Slit2Q9R1B9 1521 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Mcm4P49717 862 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 VgfQ0VGU4 617 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Sv2bQ8BG39 683 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Irx6Q9ER75 438 aa11.82□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Msh6P54276 1358 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Tnnt1O88346 262 aa11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Aldh8a1Q8BH00 487 aa11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Dhx30Q99PU8 1217 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Chmp4bQ9D8B3 224 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Atg4a-psA0A0G2JFS9 396 aa11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Atg4aQ8C9S8 396 aa11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Ripk4Q9ERK0 786 aa11.81□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Ddit3P35639 168 aa11.8□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 C3P01027 1663 aa11.8□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Foxp4Q9DBY0 795 aaKnown RBP11.79□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Trpm3Q5F4S9 1721 aa11.79□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Myo5bP21271 1818 aa11.79□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Q3TQI7 289 aaKnown RBP11.79□□□□□ -0.52
Cpsf3-201ENSMUST00000067284 Amotl2Q8K371 772 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms