RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Arfgef2A2A5R2 1792 aa24.45■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Pnpla7A2AJ88 1352 aa24.45■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Larp1Q6ZQ58 1072 aaKnown RBP24.45■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Tns2Q8CGB6 1400 aa24.43■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Nsd3Q6P2L6 1439 aa24.42■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Stk31Q99MW1 1018 aa24.42■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Iqcf3Q9D498 203 aa24.42■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Arhgap33Q80YF9 1305 aa24.41■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Mapk8ip3Q9ESN9 1337 aa24.41■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Cypt1Q8CH20 168 aa24.41■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Eif3bQ8JZQ9 803 aaKnown RBP24.41■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Q4VA45 678 aa24.4■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Tcerg1Q8CGF7 1100 aaKnown RBP24.4■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Amotl1Q9D4H4 968 aa24.39■■□□□ 1.5
Vti1b-201ENSMUST00000055262 Gm21663A0A0G2JE01 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Gm7361D3Z6R1 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 5031410I06RikE9Q4E0 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Gm1979E9QAN3 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Gm5862K7N5V5 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Gm10220K7N660 267 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Vars2Q3U2A8 1060 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Mak16Q8BGS0 296 aaKnown RBP24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Apaf1O88879 1249 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Afg3l2Q8JZQ2 802 aaKnown RBP24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 ApobrQ8VBT6 942 aa24.38■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Trpm3Q5F4S9 1721 aa24.37■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Apba2P98084 750 aa24.37■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Phkg2Q9DB30 406 aa24.37■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Erbb3Q61526 1339 aa24.36■■□□□ 1.49
Vti1b-201ENSMUST00000055262 OscarQ8VBT3 265 aa24.36■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Usp19Q3UJD6 1360 aa24.36■■□□□ 1.49
Vti1b-201ENSMUST00000055262 PappaQ8R4K8 1624 aa24.36■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Kdm2bQ6P1G2 1309 aa24.35■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Uspl1Q3ULM6 1089 aa24.35■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Ciz1Q8VEH2 845 aa24.35■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Pdzd9Q9D9M4 266 aa24.35■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Snapc4Q8BP86 1333 aa24.35■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Slc5a1Q8C3K6 665 aa24.34■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Ildr2B5TVM2 661 aa24.33■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Ccnl1Q52KE7 532 aaKnown RBP24.33■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Asic4Q7TNS7 539 aa24.33■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Chmp7Q8R1T1 451 aa24.33■■□□□ 1.49
Vti1b-201ENSMUST00000055262 Cavin4A2AMM0 362 aa24.32■■□□□ 1.48
Vti1b-201ENSMUST00000055262 TmpoQ61033 693 aaKnown RBP24.32■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Ncbp3Q8BZR9 615 aaKnown RBP24.32■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Cabp2Q9JLK4 216 aa24.32■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Q8BT18 775 aa24.32■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Aox2Q5SGK3 1345 aa24.31■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Rps6ka4Q9Z2B9 773 aa24.31■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Abca3Q8R420 1704 aa24.3■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Nop58Q6DFW4 536 aaKnown RBP24.3■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Sos2Q02384 1333 aa24.3■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Stra8P70278 393 aa24.29■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Ssfa2Q922B9 1252 aa24.29■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Uhrf1bp1B2KF50 1429 aa24.29■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Shank3Q4ACU6 1730 aa24.28■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Klc3Q91W40 508 aa24.28■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Pim2Q62070 370 aa24.27■■□□□ 1.48
Vti1b-201ENSMUST00000055262 Crb1Q8VHS2 1405 aa24.26■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Swt1Q9DBQ9 907 aa24.26■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Snap23O09044 210 aa24.24■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Dusp27Q148W8 1138 aa24.23■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Ints5Q8CHT3 1018 aa24.23■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Kiaa0319lQ8K135 1048 aa24.23■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Tjp1P39447 1745 aaKnown RBP24.23■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Ankrd13dQ6PD24 605 aa24.22■■□□□ 1.47
Vti1b-201ENSMUST00000055262 CrbnQ8C7D2 445 aa24.21■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Ezh2Q61188 746 aaKnown RBP24.2■■□□□ 1.47
Vti1b-201ENSMUST00000055262 Rtf1A2AQ19 715 aaKnown RBP24.19■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Hdac6Q9Z2V5 1149 aa24.19■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Nkx2-3P97334 362 aa24.19■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Ralbp1Q62172 648 aa24.19■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Ccdc155Q80VJ8 648 aa24.19■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Abcc12Q80WJ6 1366 aa24.18■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Myo5bP21271 1818 aa24.18■■□□□ 1.46
Vti1b-201ENSMUST00000055262 VirmaA2AIV2 1811 aaKnown RBP24.17■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Speer4f1Q9D5Q6 258 aa24.17■■□□□ 1.46
Vti1b-201ENSMUST00000055262 Sos1Q62245 1319 aa24.14■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Bicdl1A0JNT9 577 aa24.13■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Atg3Q9CPX6 314 aa24.13■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Ubr2Q6WKZ8 1755 aa24.12■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Rad21Q61550 635 aaKnown RBP24.12■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Jmjd4Q8BFT6 427 aa24.12■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Hmgb2P30681 210 aaKnown RBP24.11■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Ofd1Q80Z25 1017 aa24.1■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Anks4bQ8K3X6 423 aa24.1■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Zfp444Q3TDV8 331 aaKnown RBP24.09■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Neurod2Q62414 383 aa24.09■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Cap2Q9CYT6 476 aa24.08■■□□□ 1.45
Vti1b-201ENSMUST00000055262 Ccdc85cE9Q6B2 420 aa24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 AceP09470 1312 aa24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Smg7Q5RJH6 1138 aaKnown RBP24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Dcaf5Q80T85 946 aa24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Efcab2Q9CQ46 164 aa24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Atxn3Q9CVD2 355 aa24.07■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Fam198bQ3UPI1 517 aa24.06■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Igsf1Q7TQA1 1317 aa24.05■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Gnai1B2RSH2 354 aa24.04■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Kif23E9Q5G3 953 aa24.04■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Ccdc30Q8BVF4 654 aa24.04■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms