RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Atg4aQ8C9S8 396 aa12.05□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Gdpd2Q9ESM6 539 aa12.05□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Bcar3Q9QZK2 820 aa12.05□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Cyp46a1Q9WVK8 500 aa12.05□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Tm6sf1P58749 370 aa12.04□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 TmpoQ61033 693 aaKnown RBP12.04□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Synj2Q9D2G5 1434 aa12.04□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Chl1P70232 1209 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Mcm2P97310 904 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Prune1Q8BIW1 454 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Cyp27a1Q9DBG1 533 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Ercc6l2Q9JIM3 1537 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Rrp12Q6P5B0 1295 aaKnown RBP12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Aldh1l2Q8K009 923 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 HnrnpmQ9D0E1 729 aaKnown RBP12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Irx6Q9ER75 438 aa12.03□□□□□ -0.48
Ccdc40-202ENSMUST00000053440 Sox12Q04890 314 aa12.02□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Taok2Q6ZQ29 1240 aa12.02□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 CatipB9EKE5 520 aa12.02□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 PogkQ80TC5 607 aa12.02□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Sv2bQ8BG39 683 aa12.02□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Spef2Q8C9J3 1734 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Nwd1A6H603 1563 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 NpatQ8BMA5 1420 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Fam83gQ5SWY7 812 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Phactr2B1AVP0 632 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Hmox1P14901 289 aa12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Chd4Q6PDQ2 1915 aaKnown RBP12.01□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Tnnt1O88346 262 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Erc2Q6PH08 957 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 IghaA0A0A6YXW6 389 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Zkscan16A2ALW2 728 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Rtf1A2AQ19 715 aaKnown RBP12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Hsp90b1P08113 802 aaKnown RBP12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Itsn1Q9Z0R4 1714 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Zdhhc9P59268 364 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Tshz3Q8CGV9 1081 aa12□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Gm9992B2RWK3 458 aa11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Unc93aQ710D3 458 aa11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Srgap3Q812A2 1099 aa11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Gadd45bP22339 160 aa11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Rnf214Q8BFU3 668 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Kif20bQ80WE4 1774 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Dhx16G3X8X0 1044 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Q3TQI7 289 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 4930407I10RikD3Z5T8 1512 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Elp1Q7TT37 1333 aaKnown RBP11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Syce3B5KM66 88 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Cpa2Q504N0 417 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 PplQ9R269 1755 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Rbm27Q5SFM8 1060 aaKnown RBP11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Ddrgk1Q80WW9 315 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 4931400O07RikQ9D4M5 137 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Ppp1r42Q8R1Z4 357 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 RestQ8VIG1 1082 aa11.98□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 PtpruB1AUH1 1446 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Hoxb7P09024 217 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 NexnQ7TPW1 607 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Nol12Q8BG17 217 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Nphp1Q9QY53 687 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 ImpactO55091 318 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Gnai2P08752 355 aaKnown RBP11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Ptpdc1Q6NZK8 747 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Plppr3Q7TPB0 716 aa11.97□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Cabp4Q8VHC5 271 aa11.96□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Kif1aP33173 1695 aa11.96□□□□□ -0.49
Ccdc40-202ENSMUST00000053440 Cwc27Q3TKY6 469 aa11.96□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Phf23Q8BSN5 401 aa11.96□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Zkscan2G3X952 960 aa11.95□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Gemin5Q8BX17 1502 aaKnown RBP11.95□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Zfp777B9EKF4 885 aa11.95□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Rbm10Q99KG3 930 aaKnown RBP11.95□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 DmtnQ9WV69 405 aa11.95□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Mrps27Q8BK72 415 aaKnown RBP11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Pank2Q3U4S0 443 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Rsph4aQ8BYM7 716 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Mdc1Q5PSV9 1707 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Gm21190A0A0G2JGJ6 266 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Filip1lQ6P6L0 1131 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Jakmip1Q8BVL9 626 aa11.94□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Nckap5lQ6GQX2 1323 aa11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 EvcP57680 1005 aa11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Eya1P97767 591 aa11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Ccne1Q61457 408 aa11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Pdia4P08003 638 aaKnown RBP11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Q3UJC8 639 aa11.93□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Erbb4Q61527 1308 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Vwa3bJ9JI28 736 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 MccE9PWI3 1003 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Mum1Q6DID5 682 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Dip2aQ8BWT5 1523 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Parp14Q2EMV9 1817 aa11.92□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Mmp8O70138 465 aa11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Pik3c2bE9QAN8 1632 aa11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Tpx2A2APB8 745 aaKnown RBP11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 VgfQ0VGU4 617 aa11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Gripap1Q8VD04 806 aa11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Astn2Q80Z10 1352 aa11.91□□□□□ -0.5
Ccdc40-202ENSMUST00000053440 Gm45015A0A140LII9 184 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms