RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rnf17Q99MV7 1640 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Cplx1P63040 134 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Smarca5Q91ZW3 1051 aaKnown RBP14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 UvssaQ9D479 717 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Irf9Q61179 399 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Agtpbp1Q641K1 1218 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Ptpdc1Q6NZK8 747 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Col17a1Q07563 1470 aa14.29□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Ell2Q3UKU1 639 aa14.29□□□□□ -0.12
Pcif1-201ENSMUST00000041643 AnlnQ8K298 1121 aaKnown RBP14.29□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Prkar2bP31324 416 aa14.29□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Rrs1Q9CYH6 365 aaKnown RBP14.29□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Gsdma2Q32M21 443 aa14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Mum1Q6DID5 682 aa14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Rhot2Q8JZN7 620 aa14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 1700010I14RikQ7TPG0 532 aa14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Tnpo1Q8BFY9 898 aaKnown RBP14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Ppp1r42Q8R1Z4 357 aa14.28□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Yeats2Q3TUF7 1407 aa14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Hap1O35668 628 aa14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 GpkowQ56A08 488 aa14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 PogkQ80TC5 607 aa14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Mad1l1Q9WTX8 717 aaKnown RBP14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Kank1E9Q238 1360 aa14.27□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Map3k2Q61083 619 aa14.27□□□□□ -0.13
Pcif1-201ENSMUST00000041643 EappQ5BU09 281 aa14.27□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Klf15Q9EPW2 415 aa14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Cct4P80315 539 aaKnown RBP14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Krt82Q99M74 516 aa14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Usp48Q3V0C5 1052 aa14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Ddx58Q6Q899 926 aa14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Slain2Q8CI08 581 aa14.26□□□□□ -0.13
Pcif1-201ENSMUST00000041643 BccipQ9CWI3 316 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Nol12Q8BG17 217 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Bicd2Q921C5 820 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Odf2lQ9D478 642 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Sh3bgrQ9WUZ7 214 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Pprc1Q6NZN1 1644 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Jakmip1Q8BVL9 626 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Efcab2Q9CQ46 164 aa14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 ScaperF8VQ70 1398 aaKnown RBP14.25□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Glipr1l2Q9CQ35 332 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Hoxc9P09633 260 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Hecw1Q8K4P8 1604 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Ehmt1Q5DW34 1296 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Kif14L0N7N1 1674 aaKnown RBP14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Brf1Q8CFK2 676 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Q9D9S1 216 aa14.24□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Soga3Q6NZL0 945 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Kri1Q8VDQ9 704 aaKnown RBP14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Irx3P81067 507 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Pde4dQ01063 747 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Rec8Q8C5S7 591 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Amotl1Q9D4H4 968 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Plxnc1Q9QZC2 1574 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Slc26a8Q8R0C3 999 aa14.23□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Lamc1P02468 1607 aaKnown RBP14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Pik3r4Q8VD65 1358 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Cfap99A0A140LIX9 648 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Polr3gQ6NXY9 223 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Eya1P97767 591 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Wwc1Q5SXA9 1104 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 AnkarA2RT91 1465 aa14.22□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Ankrd44B2RXR6 993 aa14.21□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Nsfl1cQ9CZ44 370 aaKnown RBP14.21□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Myd88P22366 296 aa14.21□□□□□ -0.13
Pcif1-201ENSMUST00000041643 AU022751B1B0V2 589 aa14.21□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Kif4P33174 1231 aa14.21□□□□□ -0.13
Pcif1-201ENSMUST00000041643 Wdhd1P59328 1117 aa14.21□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Top1mtQ8R4U6 593 aa14.21□□□□□ -0.14
Pcif1-201ENSMUST00000041643 AU015836B2RUM3 263 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Hoxa7P02830 229 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Smc5Q8CG46 1101 aaKnown RBP14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 VeztQ3ZK22 780 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Echdc1Q9D9V3 322 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cspp1B2RX88 1205 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Ccnl1Q52KE7 532 aaKnown RBP14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Tarbp1E9Q368 1579 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Idi1P58044 227 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Ankle2Q6P1H6 964 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Nos1Q9Z0J4 1429 aa14.2□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Abcc3B2RX12 1523 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Slf2Q6P9P0 1278 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cadps2Q8BYR5 1297 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Dot1lQ6XZL8 1540 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Hs1bp3Q3TC93 395 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Riok1Q922Q2 567 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Taf7Q9R1C0 341 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Fhod3Q76LL6 1578 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 RdxP26043 583 aaKnown RBP14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Gpatch3Q8BIY1 525 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Rbm28Q8CGC6 750 aaKnown RBP14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Gripap1Q8VD04 806 aa14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Utp3Q9JI13 469 aaKnown RBP14.19□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Plcd4Q8K3R3 807 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Rapgef3Q8VCC8 918 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Bag3Q9JLV1 577 aaKnown RBP14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Ifit1bl2Q3U687 466 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Fam83gQ5SWY7 812 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cfap69Q8BH53 942 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 153.5 ms