RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Bbof1Q3V079 533 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Zfp42P22227 288 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Znf704Q9ERQ3 566 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Sh2d4bA6X942 431 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Maats1Q8BRC6 783 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ubap1lG3UW59 384 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ccdc141E9Q8Q6 1531 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Kiaa1524Q8BWY9 907 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ttll13A4Q9F6 804 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Cfap57Q9D180 1249 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Tmco5aQ9D9D5 303 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Nop53Q8BK35 484 aaKnown RBP16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Secisbp2lQ6A098 1086 aaKnown RBP16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Stmn4P63042 189 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ttc5Q99LG4 440 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Mapk8ip1Q9WVI9 707 aa16.75■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Fchsd2Q3USJ8 740 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 LrpprcQ6PB66 1392 aaKnown RBP16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Gm42641I6L9G2 585 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 AtripQ8BMG1 785 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Tnpo1Q8BFY9 898 aaKnown RBP16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Iqgap2Q3UQ44 1575 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Nol12Q8BG17 217 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Tmc1Q8R4P5 757 aa16.74■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Rad54l2Q99NG0 1466 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Bms1Q6PGF5 1284 aaKnown RBP16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Cct4P80315 539 aaKnown RBP16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ddx19aQ61655 478 aaKnown RBP16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Cc2d1bQ8BRN9 848 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Kif21aQ9QXL2 1672 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Myom3A2ABU4 1439 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Rnf34Q99KR6 376 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Tacc1Q6Y685 774 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Srgap3Q812A2 1099 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 MvpQ9EQK5 861 aa16.73■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Cdr1E9Q0B4 517 aa16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Fez2Q6TYB5 348 aa16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 IbtkQ6ZPR6 1352 aaKnown RBP16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Wdhd1P59328 1117 aa16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Cnnm1Q0GA42 951 aa16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Atad2bE9Q166 1460 aaKnown RBP16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Lrsam1Q80ZI6 727 aa16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Mybbp1aQ7TPV4 1344 aaKnown RBP16.72■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Erich4Q3UNU4 136 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Fam13aQ8BGI4 693 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Krt7Q9DCV7 457 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 IbspQ61711 324 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Ddx10Q80Y44 875 aaKnown RBP16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Exoc8Q6PGF7 716 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Tax1bp1Q3UKC1 814 aaKnown RBP16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Rapgef4Q9EQZ6 1011 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Rbm27Q5SFM8 1060 aaKnown RBP16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Hspa4Q61316 841 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Mum1Q6DID5 682 aa16.71■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Fam107bQ3TGF2 131 aa16.71■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Ctnna2Q61301 953 aa16.71■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Trim25Q61510 634 aaKnown RBP16.71■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Golim4Q8BXA1 655 aa16.71■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Fermt2Q8CIB5 680 aa16.71■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Nphp3Q7TNH6 1325 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Paxbp1P58501 919 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Cfap65Q3V0B4 1847 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Sptbn5F6UCX4 1208 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Jakmip1Q8BVL9 626 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Als2cr12Q8BVM7 383 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Paip2Q9D6V8 124 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Diaph1O08808 1255 aa16.7■□□□□ 0.26
Col7a1-201ENSMUST00000026740 SlmapQ3URD3 845 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Themis2Q91YX0 663 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Egfem1Q8C088 590 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Usp37Q8C0R0 979 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Hsf2bpQ9D4G2 338 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Sh3d21Q7TSG5 549 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Galntl5Q9D4M9 431 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Map7d1A2AJI0 846 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 GlmnQ8BZM1 596 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Cul5Q9D5V5 780 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Asxl1P59598 1514 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Ctr9Q62018 1173 aaKnown RBP16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 IqcgQ80W32 419 aa16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 EprsQ8CGC7 1512 aaKnown RBP16.69■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Cfap100Q80VN0 613 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 AidaQ8C4Q6 305 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Atp2b2Q9R0K7 1198 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Uchl5Q9WUP7 329 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Ccdc170D3YXL0 722 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Iffo1Q8BXL9 562 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Bcl11bQ99PV8 884 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Cfap69Q8BH53 942 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Pms1Q8K119 917 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Dusp27Q148W8 1138 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Ccdc42Q5SV66 316 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Ktn1Q61595 1327 aaKnown RBP16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Kdm3aQ6PCM1 1323 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Rnf41Q8BH75 317 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Tubb4aQ9D6F9 444 aa16.68■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Mex3cQ05A36 652 aaKnown RBP16.67■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Nol8Q3UHX0 1147 aaKnown RBP16.67■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Zranb3Q6NZP1 1069 aa16.67■□□□□ 0.26
Col7a1-201ENSMUST00000026740 Fmnl3Q6ZPF4 1028 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms