RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Fbln2P37889 1221 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Hap1O35668 628 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 MpripP97434 1024 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 OptnQ8K3K8 584 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Frmpd2A0A140LI67 1392 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Rreb1Q3UH06 1700 aaKnown RBP9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Myom1Q62234 1667 aaKnown RBP9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Dixdc1Q80Y83 711 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Acsbg1Q99PU5 721 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 BccipQ9CWI3 316 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Zeb2Q9R0G7 1215 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Apaf1O88879 1249 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Tpm1P58771 284 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 4930572O03RikQ8C5Y0 211 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Mical1Q8VDP3 1048 aa9.16□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Lrrcc1Q69ZB0 1026 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ipo7Q9EPL8 1038 aaKnown RBP9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Sbno1Q689Z5 1390 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Gm21680A0A0G2JGR8 267 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Phactr2B1AVP0 632 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Tpm2P58774 284 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Q7TT23 1179 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Pank1Q8K4K6 548 aa9.15□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Bcl11aQ9QYE3 773 aa9.15□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Prl7d1P04769 244 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 ChgaP26339 463 aaKnown RBP9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Fkbp4P30416 458 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Cchcr1Q8K2I2 770 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Smc3Q9CW03 1217 aaKnown RBP9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Plekhh1Q80TI1 1356 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Cps1Q8C196 1500 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Qtrt2B8ZXI1 415 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 4933402E13RikQ9D4D2 429 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Wdr17E9Q271 1322 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 IbtkQ6ZPR6 1352 aaKnown RBP9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Odf2A3KGV1 830 aaKnown RBP9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Tpm4Q6IRU2 248 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Ak7Q9D2H2 614 aa9.14□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Cyp46a1Q9WVK8 500 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Zkscan2G3X952 960 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Hoxa7P02830 229 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Rfx1P48377 963 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Trim29Q8R2Q0 587 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Speer4bQ9D9F7 267 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Itsn2Q9Z0R6 1659 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 SlkO54988 1233 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Hmox1P14901 289 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Fchsd2Q3USJ8 740 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Dzip1Q8BMD2 852 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Kif24Q6NWW5 1356 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 SkilQ60665 675 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Nutm1Q8BHP2 1126 aa9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Rbm28Q8CGC6 750 aaKnown RBP9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Prkrip1Q9CWV6 186 aaKnown RBP9.13□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Pola1P33609 1465 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Me1P06801 572 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Slc35g1Q8BY79 368 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Rec8Q8C5S7 591 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Trim34aQ99PP6 485 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Phlpp1Q8CHE4 1687 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gm21663A0A0G2JE01 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gm7361D3Z6R1 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 5031410I06RikE9Q4E0 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gm1979E9QAN3 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gm5862K7N5V5 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gm10220K7N660 267 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gnai2P08752 355 aaKnown RBP9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Bicd2Q921C5 820 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Psma5Q9Z2U1 241 aaKnown RBP9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Tmem2Q5FWI3 1383 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 DnmbpQ6TXD4 1580 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Kif3aP28741 701 aa9.12□□□□□ -0.95
Ddb1-201ENSMUST00000025649 PrkcshO08795 521 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Rabep1O35551 862 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Dusp27Q148W8 1138 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Kcnh5Q920E3 988 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Eif3bQ8JZQ9 803 aaKnown RBP9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Cfap99A0A140LIX9 648 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Gabpb2P81069 414 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Agtpbp1Q641K1 1218 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Hook1Q8BIL5 728 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Nek4Q9Z1J2 792 aa9.11□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Eif3aP23116 1344 aaKnown RBP9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Ddrgk1Q80WW9 315 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Amigo3Q8C2S7 508 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 KarsQ99MN1 595 aaKnown RBP9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Nwd1A6H603 1563 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Znf335A2A5K6 1337 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Ltbp4Q8K4G1 1666 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Nolc1E9Q5C9 702 aaKnown RBP9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Hmgb2P30681 210 aaKnown RBP9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Dmrt2Q8BG36 561 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Flad1Q8R123 492 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Odf2lQ9D478 642 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Sytl4Q9R0Q1 673 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 MaddQ80U28 1577 aa9.1□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Trim34bJ3QNR8 485 aa9.09□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Mre11Q61216 706 aa9.09□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Cabp2Q9JLK4 216 aa9.09□□□□□ -0.95
Ddb1-201ENSMUST00000025649 Nphp1Q9QY53 687 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms