RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Rcan3Q9JKK0 239 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Uhrf1bp1lA2RSJ4 1457 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Plxnc1Q9QZC2 1574 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Atg4a-psA0A0G2JFS9 396 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 St18Q80TY4 1045 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Atg4aQ8C9S8 396 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Topbp1Q6ZQF0 1515 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Erbb4Q61527 1308 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Zkscan16A2ALW2 728 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Gpatch11Q3UFS4 262 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Clcn1Q64347 994 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 TmpoQ61033 693 aaKnown RBP12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Abca8aQ8K442 1620 aa12.56□□□□□ -0.4
Clip3-201ENSMUST00000014065 Idi2Q8BFZ6 227 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 PtmsQ9D0J8 101 aaKnown RBP12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ncapd2Q8K2Z4 1392 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Cwc27Q3TKY6 469 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Stk3Q9JI10 497 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Zdhhc9P59268 364 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 Olfml1Q8BSH2 233 aa12.55□□□□□ -0.4
Clip3-201ENSMUST00000014065 EvcP57680 1005 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Fam83gQ5SWY7 812 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ptpdc1Q6NZK8 747 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Zkscan2G3X952 960 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Chd1lQ9CXF7 900 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Nphp1Q9QY53 687 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 DnmbpQ6TXD4 1580 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Kif24Q6NWW5 1356 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Gzf1Q4VBD9 706 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ppp1r42Q8R1Z4 357 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ripk4Q9ERK0 786 aa12.54□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ttc37F8VPK0 1563 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Cep170bQ80U49 1574 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Eif4a2P10630 407 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Slc4a10Q5DTL9 1118 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Irf5P56477 497 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Cabp4Q8VHC5 271 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Sipa1l1Q8C0T5 1782 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 MaddQ80U28 1577 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Kiaa0556Q8C753 1610 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Eif2ak4Q9QZ05 1648 aa12.53□□□□□ -0.4
Clip3-201ENSMUST00000014065 Zscan25B2RX31 543 aa12.52□□□□□ -0.4
Clip3-201ENSMUST00000014065 Gnai2P08752 355 aaKnown RBP12.52□□□□□ -0.4
Clip3-201ENSMUST00000014065 Med14A2ABV5 1459 aaKnown RBP12.52□□□□□ -0.4
Clip3-201ENSMUST00000014065 Ehbp1l1Q99MS7 1716 aa12.52□□□□□ -0.4
Clip3-201ENSMUST00000014065 MarsQ68FL6 902 aaKnown RBP12.52□□□□□ -0.41
Clip3-201ENSMUST00000014065 Naa30Q8CES0 364 aa12.52□□□□□ -0.41
Clip3-201ENSMUST00000014065 Utp3Q9JI13 469 aaKnown RBP12.52□□□□□ -0.41
Clip3-201ENSMUST00000014065 RestQ8VIG1 1082 aa12.52□□□□□ -0.41
Clip3-201ENSMUST00000014065 Uhrf1bp1B2KF50 1429 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Sos1Q62245 1319 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Brpf1B2RRD7 1212 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Tm6sf1P58749 370 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Cul9Q80TT8 1865 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 CgnP59242 1191 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Zbtb22Q9Z0G7 638 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Adgrl1Q80TR1 1466 aa12.51□□□□□ -0.41
Clip3-201ENSMUST00000014065 Pof1bQ8K4L4 587 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Akap12Q9WTQ5 1684 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Nrxn1Q9CS84 1514 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Atp6v1dP57746 247 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 EappQ5BU09 281 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 F2rP30558 430 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Gse1Q3U3C9 1213 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Usp48Q3V0C5 1052 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Cavin2Q63918 418 aaKnown RBP12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Samm50Q8BGH2 469 aa12.5□□□□□ -0.41
Clip3-201ENSMUST00000014065 Elp1Q7TT37 1333 aaKnown RBP12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 Tex2Q6ZPJ0 1128 aaKnown RBP12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 HnrnpmQ9D0E1 729 aaKnown RBP12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 MsnP26041 577 aaKnown RBP12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 Mcm3P25206 812 aaKnown RBP12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 Polr3gQ6NXY9 223 aa12.49□□□□□ -0.41
Clip3-201ENSMUST00000014065 Ppp1r18Q8BQ30 594 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Aldh1l2Q8K009 923 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 AnlnQ8K298 1121 aaKnown RBP12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Mad1l1Q9WTX8 717 aaKnown RBP12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 AdgbG3UZ78 1657 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Gm45015A0A140LII9 184 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Gm18336A0A140LIU8 765 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Chl1P70232 1209 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Bach1P97302 739 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Nol11Q8BJW5 723 aaKnown RBP12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Mrps27Q8BK72 415 aaKnown RBP12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Serpina10Q8R121 448 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Slx4ipQ9D7Y9 413 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 AglF8VPN4 1532 aa12.48□□□□□ -0.41
Clip3-201ENSMUST00000014065 Mknk2Q8CDB0 459 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Gm21190A0A0G2JGJ6 266 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Map3k13Q1HKZ5 959 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 KinQ8K339 391 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Glipr1l2Q9CQ35 332 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Atp7bQ64446 1462 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Smarce1O54941 411 aaKnown RBP12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Chrna2Q91X60 512 aa12.47□□□□□ -0.41
Clip3-201ENSMUST00000014065 Depdc5P61460 1591 aa12.46□□□□□ -0.41
Clip3-201ENSMUST00000014065 Cdc42bpgQ80UW5 1551 aa12.46□□□□□ -0.41
Clip3-201ENSMUST00000014065 Mum1Q6DID5 682 aa12.46□□□□□ -0.42
Clip3-201ENSMUST00000014065 Pdcl2Q78Y63 240 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms