RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Bcl2l13P59017 434 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 4930572O03RikQ8C5Y0 211 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gnai3Q9DC51 354 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gm21663A0A0G2JE01 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gm7361D3Z6R1 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 5031410I06RikE9Q4E0 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gm1979E9QAN3 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gm5862K7N5V5 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gm10220K7N660 267 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 CanxP35564 591 aaKnown RBP9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Col18a1P39061 1774 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Q8BT18 775 aa9.53□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Als2Q920R0 1651 aa9.53□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Nid2O88322 1403 aa9.53□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Cdc37l1Q9CZP7 335 aa9.52□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Rad17Q6NXW6 688 aa9.52□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Myt1Q8CFC2 1127 aa9.52□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 G3bp1P97855 465 aaKnown RBP9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Sema6bO54951 886 aa9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Sugp2Q8CH09 1067 aa9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Emilin2Q8K482 1074 aa9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 MypopQ8R4U1 393 aa9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Amotl1Q9D4H4 968 aa9.51□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 N4bp2F8VQG7 1678 aaKnown RBP9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Fbln2P37889 1221 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Exoc5Q3TPX4 708 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Scaf1Q5U4C3 1256 aaKnown RBP9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Sgsm1Q8BPQ7 1093 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Egfem1Q8C088 590 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Slc5a1Q8C3K6 665 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Eif3bQ8JZQ9 803 aaKnown RBP9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 KarsQ99MN1 595 aaKnown RBP9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Fkbp4P30416 458 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Trim58Q5NCC9 485 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Zmym3Q9JLM4 1370 aa9.5□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Pnmal2G3X9N3 661 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Btbd11Q6GQW0 1109 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Ppp1r37Q8BKR5 712 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 ApobrQ8VBT6 942 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 EspnQ9ET47 871 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Maco1Q7TQE6 664 aaKnown RBP9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Rlbp1Q9Z275 317 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 PrkcshO08795 521 aa9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Hsp90ab1P11499 724 aaKnown RBP9.49□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Ccdc129Q14B48 1034 aa9.48□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Duxf3A0A0N4SV92 674 aa9.48□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Col16a1Q8BLX7 1580 aa9.48□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Col15a1O35206 1367 aa9.48□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Fgd1P52734 960 aa9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Larp1Q6ZQ58 1072 aaKnown RBP9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 DccP70211 1447 aa9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Unc13bQ9Z1N9 1602 aa9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Parp14Q2EMV9 1817 aa9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Elp1Q7TT37 1333 aaKnown RBP9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Pdzd9Q9D9M4 266 aa9.47□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Pik3c2aQ61194 1686 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Pard3Q99NH2 1333 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Cnnm1Q0GA42 951 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Ddb1Q3U1J4 1140 aaKnown RBP9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Pm20d1Q8C165 503 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Phkg2Q9DB30 406 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 Kdm6aO70546 1401 aa9.46□□□□□ -0.89
Crnkl1-201ENSMUST00000001818 InhbeO08717 350 aa9.46□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 CastP51125 788 aa9.46□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Eif2s2Q99L45 331 aaKnown RBP9.46□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ccnl1Q52KE7 532 aaKnown RBP9.46□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Mon2Q80TL7 1715 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Atp10bB1AWN4 1474 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 DaxxO35613 739 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Aifm3Q3TY86 605 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Asic4Q7TNS7 539 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Amer1Q7TS75 1132 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ak7Q9D2H2 614 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Camta1A2A891 1682 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Chpf2Q3UU43 768 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Slx1bQ8BX32 270 aa9.45□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Triml2E9PW10 424 aa9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Smg7Q5RJH6 1138 aaKnown RBP9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Mfap1aC0HKD8 439 aaKnown RBP9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Mfap1bC0HKD9 439 aaKnown RBP9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Plekhm2Q80TQ5 1018 aa9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ankrd50F7BE84 1390 aa9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Sv2bQ8BG39 683 aa9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Mbd3Q9Z2D8 285 aaKnown RBP9.44□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ccdc146E9Q9F7 977 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Sik1Q60670 779 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 GorabQ8BRM2 368 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Vamp4O70480 141 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Q3UPC7 1272 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ric3Q8BPM6 367 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Atp7bQ64446 1462 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Sos1Q62245 1319 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Kif1aP33173 1695 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 AU019823E9PUQ3 292 aa9.43□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Bsdc1Q80Y55 427 aa9.42□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ankrd23Q812A3 306 aa9.42□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Rtn4Q99P72 1162 aaKnown RBP9.42□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Simc1E9Q6E9 1354 aa9.42□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Stk11ipQ3TAA7 1072 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 MpndQ3TV65 487 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms