RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 DDX58O95786 925 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 SRCP12931 536 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 UBA1P22314 1058 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 RXRGP48443 463 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 TFAP4Q01664 338 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 LRMPQ12912 555 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 MAD2L1Q13257 205 aaPredicted RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 NAB2Q15742 525 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 KCNT1Q5JUK3 1230 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 IRAK1BP1Q5VVH5 260 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 FRG2Q64ET8 278 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 DUS1LQ6P1R4 473 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 SARM1Q6SZW1 724 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 IKBIPQ70UQ0 350 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 NFE4Q86UQ8 179 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 SATL1Q86VE3 508 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 METTL27Q8N6F8 245 aaPredicted RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 PCDH20Q8N6Y1 951 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 CNBD1Q8NA66 436 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 MAPK1IP1LQ8NDC0 245 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 MAGEC3Q8TD91 643 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 SCFD2Q8WU76 684 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 SGCDQ92629 289 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 IGSF8Q969P0 613 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 LITAFQ99732 161 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 NCAPGQ9BPX3 1015 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 PYGO2Q9BRQ0 406 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 ITPAQ9BY32 194 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 UBA5Q9GZZ9 404 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 KAT14Q9H8E8 782 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 MMP25Q9NPA2 562 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 EIF2B3Q9NR50 452 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 ACSS1Q9NUB1 689 aaPredicted RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 HCFC1R1Q9NWW0 138 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 MCM9Q9NXL9 1143 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 CNOT8Q9UFF9 292 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 LOXL2Q9Y4K0 774 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 LAS1LQ9Y4W2 734 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 C1orf226A1L170 272 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 LILRA5A6NI73 299 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 AP3D1O14617 1153 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 HS3ST1O14792 307 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 MID1O15344 667 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 SPINT2O43291 252 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 HCRTR2O43614 444 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 TMPOP42166 694 aaKnown RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 PRCPP42785 496 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 NAP1L1P55209 391 aaKnown RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 PRAMEP78395 509 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 MRPS34P82930 218 aaKnown RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 PPIGQ13427 754 aaKnown RBP eCLIP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 ADIPOQQ15848 244 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 DCST1Q5T197 706 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 GPATCH4Q5T3I0 446 aaKnown RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 GKAP1Q5VSY0 366 aaPredicted RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 ACSM2BQ68CK6 577 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 ZNF280DQ6N043 979 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 GLDNQ6ZMI3 551 aaPredicted RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 DSG4Q86SJ6 1040 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 TEX11Q8IYF3 940 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 SPAG16Q8N0X2 631 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 SPATA22Q8NHS9 363 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 ZKSCAN4Q969J2 545 aaPredicted RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 MOAP1Q96BY2 351 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 CMTM3Q96MX0 182 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 CMKLR1Q99788 373 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 CHCHD6Q9BRQ6 235 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 FTOQ9C0B1 505 aaKnown RBP eCLIP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 MAF1Q9H063 256 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 PDZD7Q9H5P4 517 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 SEBOXQ9HB31 216 aaPredicted RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 PCDH9Q9HC56 1237 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 STK39Q9UEW8 545 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 FBXW11Q9UKB1 542 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 POU2F3Q9UKI9 436 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
DENND4A-205ENST00000562540 LYVE1Q9Y5Y7 322 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 SESN1Q9Y6P5 492 aa2.99□□□□□ -1.93
DENND4A-205ENST00000562540 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 IGKV6D-41A0A0C4DH26 115 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 KANSL1LA0AUZ9 987 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 FSD2A1L4K1 749 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 PMS2P5A8MQ11 134 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 A8MZ25 164 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 MYO1GB0I1T2 1018 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 M0QZ24 198 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 ATP2A1O14983 1001 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 SCAMP1O15126 338 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 JRKO75564 520 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 TMEM11P17152 192 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 GNL1P36915 607 aaPredicted RBP2.98□□□□□ -1.93
DENND4A-205ENST00000562540 USP8P40818 1118 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 UBA7P41226 1012 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 FASLGP48023 281 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 GALCP54803 685 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 DRG2P55039 364 aaKnown RBP2.98□□□□□ -1.93
DENND4A-205ENST00000562540 TAS2R38P59533 333 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 TAS2R40P59535 323 aa2.98□□□□□ -1.93
DENND4A-205ENST00000562540 LMOD3Q0VAK6 560 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms