RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 SLC30A9Q6PML9 568 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 MARK2Q7KZI7 788 aaKnown RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 ADGRG6Q86SQ4 1221 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 LINC00523Q86TU6 105 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 C17orf82Q86X59 251 aaPredicted RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 SLC35F6Q8N357 371 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 RASGEF1CQ8N431 466 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 DCBLD1Q8N8Z6 715 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 CCDC89Q8N998 374 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 OR4K2Q8NGD2 314 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 ZDHHC1Q8WTX9 485 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 DEPDC7Q96QD5 511 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 ABCG4Q9H172 646 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 OR2AG1Q9H205 316 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 DPEP2Q9H4A9 486 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 SPATS2LQ9NUQ6 558 aaKnown RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 SMOXQ9NWM0 555 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 PAK5Q9P286 719 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 ATXN10Q9UBB4 475 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 APPL1Q9UKG1 709 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 TMPRSS11EQ9UL52 423 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 TTC7AQ9ULT0 858 aaPredicted RBP8.46□□□□□ -1.06
APLF-202ENST00000394342 CLCA2Q9UQC9 943 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 ST14Q9Y5Y6 855 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 ARL5AQ9Y689 179 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 FAM208BQ5VWN6 2430 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 SDK2Q58EX2 2172 aa8.46□□□□□ -1.06
APLF-202ENST00000394342 FAM149AA5PLN7 773 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 CES2O00748 559 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 GAPDHSO14556 408 aaPredicted RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 KMOO15229 486 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 GRID2O43424 1007 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 NUDT21O43809 227 aaKnown RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 MT-CO3P00414 261 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 C1QTNF9P0C862 333 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 ZNF8P17098 575 aaPredicted RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 HADHAP40939 763 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 ACTR1BP42025 376 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 LMAN1P49257 510 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 CLCNKAP51800 687 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 ACTR1AP61163 376 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 TARDBPQ13148 414 aaKnown RBP eCLIP8.45□□□□□ -1.06
APLF-202ENST00000394342 SEMA5AQ13591 1074 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 GTF2H3Q13889 308 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 CHRNA6Q15825 494 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 FAM151BQ6UXP7 276 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 RBM44Q6ZP01 1051 aaKnown RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 LRRTM4Q86VH4 590 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 DDHD1Q8NEL9 900 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 GRAMD1AQ96CP6 724 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 CCDC3Q9BQI4 270 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 TIMM29Q9BSF4 260 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 ARFGAP3Q9NP61 516 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 TRMT1Q9NXH9 659 aaKnown RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 DKK4Q9UBT3 224 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 PLEKHM1Q9Y4G2 1056 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 PCYT1BQ9Y5K3 369 aaPredicted RBP8.45□□□□□ -1.06
APLF-202ENST00000394342 ITPR1Q14643 2758 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 MGAQ8IWI9 3026 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 CHD6Q8TD26 2715 aa8.45□□□□□ -1.06
APLF-202ENST00000394342 LOC400499M0QZD8 3231 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 MDC1Q14676 2089 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 E7EVH7 732 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 H7C0S8 307 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 PGRMC1O00264 195 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 NTN3O00634 580 aaPredicted RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 ZW10O43264 779 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 LDB2O43679 373 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 BUD23O43709 281 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 KCNJ13O60928 360 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 CSO75390 466 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 SRP72O76094 671 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 CDK14O94921 469 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 PRAMEF1O95521 474 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 ECEL1O95672 775 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 GAS8O95995 478 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 ACP5P13686 325 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 SLC2A4P14672 509 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 ETS1P14921 441 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 PSMA3P25788 255 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 RPL22P35268 128 aaKnown RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 GPR3P46089 330 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 CLDN6P56747 220 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 XIAPP98170 497 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 CCDC173Q0VFZ6 552 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 CDH17Q12864 832 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 TMEM115Q12893 351 aaPredicted RBP8.44□□□□□ -1.06
APLF-202ENST00000394342 LAMB3Q13751 1172 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 SPIDRQ14159 915 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 PTPRCAPQ14761 206 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 POU6F1Q14863 301 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 NR1D2Q14995 579 aa8.44□□□□□ -1.06
APLF-202ENST00000394342 KHDC1Q4VXA5 237 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms