RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 CXCR5P32302 372 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 SNX1Q13596 522 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 ATP13A5Q4VNC0 1218 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 PERM1Q5SV97 790 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 CERCAMQ5T4B2 595 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 C4orf22Q6V702 233 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 PDCD7Q8N8D1 485 aaKnown RBP15.89■□□□□ 0.13
RETREG3-206ENST00000588423 CCDC89Q8N998 374 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 ZDHHC1Q8WTX9 485 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 CCDC3Q9BQI4 270 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 SMOXQ9NWM0 555 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 ZNHIT2Q9UHR6 403 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 APPL1Q9UKG1 709 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 TMPRSS11EQ9UL52 423 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 PTPRBP23467 1997 aa15.89■□□□□ 0.13
RETREG3-206ENST00000588423 FAM149AA5PLN7 773 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 C1QTNF9BB2RNN3 333 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 B4DGG1 531 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 GAPDHSO14556 408 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-206ENST00000588423 GRID2O43424 1007 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 NUDT21O43809 227 aaKnown RBP15.88■□□□□ 0.13
RETREG3-206ENST00000588423 SUN1O94901 812 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 C1QTNF9P0C862 333 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 HADHAP40939 763 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 ACTR1BP42025 376 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 CLCNKAP51800 687 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 ACTR1AP61163 376 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 SEMA5AQ13591 1074 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 CHRNA6Q15825 494 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 SLC30A9Q6PML9 568 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 FAM151BQ6UXP7 276 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 OR4K2Q8NGD2 314 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 CCDC74AQ96AQ1 378 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 NAP1L3Q99457 506 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-206ENST00000588423 OR2AG1Q9H205 316 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 ETNK1Q9HBU6 452 aa15.88■□□□□ 0.13
RETREG3-206ENST00000588423 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
RETREG3-206ENST00000588423 PCYT1BQ9Y5K3 369 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-206ENST00000588423 NTN3O00634 580 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 CES2O00748 559 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 KMOO15229 486 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 LDB2O43679 373 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 BUD23O43709 281 aaKnown RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 ZNF140P52738 457 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 CLDN6P56747 220 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 TMEM115Q12893 351 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 TARDBPQ13148 414 aaKnown RBP eCLIP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 LDLRAP1Q5SW96 308 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 CHST15Q7LFX5 561 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 NAGSQ8N159 534 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 PRELID2Q8N945 189 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 KDF1Q8NAX2 398 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 DDHD1Q8NEL9 900 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 GRAMD1AQ96CP6 724 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 DEPDC7Q96QD5 511 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 ZCCHC2Q9C0B9 1178 aaKnown RBP15.87■□□□□ 0.13
RETREG3-206ENST00000588423 PLEKHM1Q9Y4G2 1056 aa15.87■□□□□ 0.13
RETREG3-206ENST00000588423 SPEGQ15772 3267 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 AGAP14A8MT82 685 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 H7C0S8 307 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 SRP72O76094 671 aaKnown RBP15.86■□□□□ 0.13
RETREG3-206ENST00000588423 CDK14O94921 469 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 PRAMEF1O95521 474 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 RPL22P35268 128 aaKnown RBP15.86■□□□□ 0.13
RETREG3-206ENST00000588423 XIAPP98170 497 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 CDH17Q12864 832 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 LAMB3Q13751 1172 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 GTF2H3Q13889 308 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 NR1D2Q14995 579 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 ZNF648Q5T619 568 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-206ENST00000588423 ZNF438Q7Z4V0 828 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 LRRTM4Q86VH4 590 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 MARCH9Q86YJ5 346 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 GLIS1Q8NBF1 620 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 ZNF398Q8TD17 642 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 OSBPL9Q96SU4 736 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 TIMM29Q9BSF4 260 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 NRSN2Q9GZP1 204 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 ARFGAP3Q9NP61 516 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 EIF2B3Q9NR50 452 aaKnown RBP15.86■□□□□ 0.13
RETREG3-206ENST00000588423 RAB6BQ9NRW1 208 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 LRIT1Q9P2V4 623 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 RABGEF1Q9UJ41 708 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 PRKAB1Q9Y478 270 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 KCTD3Q9Y597 815 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 RNF215Q9Y6U7 377 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 PLXNB3Q9ULL4 1909 aa15.86■□□□□ 0.13
RETREG3-206ENST00000588423 E7EVH7 732 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 PGRMC1O00264 195 aaKnown RBP15.85■□□□□ 0.13
RETREG3-206ENST00000588423 ZW10O43264 779 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 UGT1A9O60656 530 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 KCNJ13O60928 360 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 MTX2O75431 263 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 ECEL1O95672 775 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 GAS8O95995 478 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 CAPNS1P04632 268 aa15.85■□□□□ 0.13
RETREG3-206ENST00000588423 ACP5P13686 325 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms