RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PLEKHG4BQ96PX9 1271 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 OR6C1Q96RD1 312 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 WDR24Q96S15 920 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 RUFY1Q96T51 708 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 MGME1Q9BQP7 344 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ULBP3Q9BZM4 244 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 XPO4Q9C0E2 1151 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 HAUS4Q9H6D7 363 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 AKIRIN1Q9H9L7 192 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 PCDH18Q9HCL0 1135 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 FBXO8Q9NRD0 319 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 KLC4Q9NSK0 619 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.51□□□□□ -1.37
CD44-221ENST00000526000 RBM22Q9NW64 420 aaKnown RBP eCLIP6.51□□□□□ -1.37
CD44-221ENST00000526000 IFNKQ9P0W0 207 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 LUZP4Q9P127 313 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 PDP2Q9P2J9 529 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SLC23A2Q9UGH3 650 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 LNPEPQ9UIQ6 1025 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CROTQ9UKG9 612 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CNOT6Q9ULM6 557 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 PCDHB3Q9Y5E6 796 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 KCNMB2Q9Y691 235 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ANKRD36A6QL64 1941 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 SCN8AQ9UQD0 1980 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 A0A0J9YYE9 177 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 C1orf232A0A0U1RR37 186 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 A0A1W2PQ67 120 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 LRRC53A6NM62 1247 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 FADS2P1A8MWK0 482 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PSMD11O00231 422 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 CAPN5O15484 640 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 GRID2O43424 1007 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 MTX2O75431 263 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 AGFG2O95081 481 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PRLP01236 227 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TRBC1P01850 177 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PDGFAP04085 211 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 NTRK1P04629 796 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 CD48P09326 243 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 ZNF8P17098 575 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 NFKBIAP25963 317 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 RPL10P27635 214 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 HSPA9P38646 679 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 SLC19A1P41440 591 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 STAT5AP42229 794 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 STC1P52823 247 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 CDH6P55285 790 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 RAB15P59190 212 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 RPS18P62269 152 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 MC1RQ01726 317 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 DPTQ07507 201 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 KLRB1Q12918 225 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PEX6Q13608 980 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 KRT81Q14533 505 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TDRD12Q587J7 1177 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 CCDC122Q5T0U0 273 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 CACHD1Q5VU97 1274 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 IRGCQ6NXR0 463 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PPP1R2P3Q6NXS1 205 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 WDR74Q6RFH5 385 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 FAM92BQ6ZTR7 304 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 LYSMD3Q7Z3D4 306 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 ATCAYQ86WG3 371 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 VSTM4Q8IW00 320 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 ESX1Q8N693 406 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 SYN2Q92777 582 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 MIB2Q96AX9 1013 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 SH3KBP1Q96B97 665 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 COX14Q96I36 57 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TEFMQ96QE5 360 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 MCCC1Q96RQ3 725 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 DPYSL5Q9BPU6 564 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 EFHD1Q9BUP0 239 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 MFRPQ9BY79 579 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TWSG1Q9GZX9 223 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 OR2AG1Q9H205 316 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 FAM83DQ9H4H8 585 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 STN1Q9H668 368 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 SARS2Q9NP81 518 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 KCTD5Q9NXV2 234 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 OGFRQ9NZT2 677 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 IMPACTQ9P2X3 320 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 ATXN10Q9UBB4 475 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 CPNE7Q9UBL6 633 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TUBD1Q9UJT1 453 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 SHOC2Q9UQ13 582 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PPIL1Q9Y3C6 166 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 TMEM184BQ9Y519 407 aaPredicted RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 BZW2Q9Y6E2 419 aaKnown RBP6.5□□□□□ -1.37
CD44-221ENST00000526000 NOTCH2Q04721 2471 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PTPN13Q12923 2485 aa6.5□□□□□ -1.37
CD44-221ENST00000526000 PDZK1P1A8MUH7 402 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms