RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ABCC6O95255 1503 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 K7EPI3 171 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 MTHFD1P11586 935 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 IRF8Q02556 426 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 NPTX1Q15818 432 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CXXC5Q7LFL8 322 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 BHMTQ93088 406 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 KCTD15Q96SI1 283 aaPredicted RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CNPPD1Q9BV87 410 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ST6GALNAC4Q9H4F1 302 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 A0A088AWK7 358 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 OR6C70A6NIJ9 312 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PGRMC2O15173 223 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 TP73O15350 636 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 OR56A5P0C7T3 313 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ADORA2AP29274 412 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CAPSQ13938 189 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 AP5B1Q2VPB7 878 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PEX5LQ8IYB4 626 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 MEIOBQ8N635 442 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF358Q9NW07 568 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ARHGEF33A8MVX0 844 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 MDM4O15151 490 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 MAGEB3O15480 346 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ATF6P18850 670 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PPIBP23284 216 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PBLDP30039 288 aaPredicted RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 FMO3P31513 532 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 GRIK4Q16099 956 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PAN2Q504Q3 1202 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF614Q8N883 585 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 NDUFB5O43674 189 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CPNE3O75131 537 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 KHDRBS3O75525 346 aaKnown RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 TMBIM6P55061 237 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 TPRG1LQ5T0D9 272 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 GPR158Q5T848 1215 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ERAP2Q6P179 960 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ATP13A1Q9HD20 1204 aa13.73□□□□□ -0.21
HCFC2-201ENST00000229330 CCDC177Q9NQR7 707 aaPredicted RBP13.73□□□□□ -0.21
HCFC2-201ENST00000229330 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ARPC2O15144 300 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ZBTB14O43829 449 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 CDH1P12830 882 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PTPN1P18031 435 aaKnown RBP13.72□□□□□ -0.21
HCFC2-201ENST00000229330 WNT3AP56704 352 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 GATA6Q92908 595 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 TSPAN18Q96SJ8 248 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 IRGMA1A4Y4 181 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 FABP12A6NFH5 140 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 YDJCA8MPS7 323 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
HCFC2-201ENST00000229330 LRATO95237 230 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PAX3P23760 479 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 RFX3P48380 749 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
HCFC2-201ENST00000229330 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 LINGO1Q96FE5 620 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PRRG1O14668 218 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ABCB7O75027 752 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 CAPZA2P47755 286 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 MSS51Q4VC12 460 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 OR52E8Q6IFG1 317 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 CDT1Q9H211 546 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 GLOD4Q9HC38 313 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 EIF2B3Q9NR50 452 aaKnown RBP13.72□□□□□ -0.21
HCFC2-201ENST00000229330 LTN1O94822 1766 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 AURKAO14965 403 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 LCP2Q13094 533 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 SYCE2Q6PIF2 218 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF517Q6ZMY9 492 aaPredicted RBP13.72□□□□□ -0.21
HCFC2-201ENST00000229330 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ANKHQ9HCJ1 492 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 NKIRAS2Q9NYR9 191 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 GMIPQ9P107 970 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 ZNHIT2Q9UHR6 403 aa13.72□□□□□ -0.21
HCFC2-201ENST00000229330 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TGFBR2P37173 567 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms