RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 LIASO43766 372 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 OPA1O60313 960 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 FUCA1P04066 466 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 C1QTNF9P0C862 333 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 LMAN1P49257 510 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CTBSQ01459 385 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 SPARCL1Q14515 664 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PDPK2PQ6A1A2 396 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 RANBP10Q6VN20 620 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 MARCH9Q86YJ5 346 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CCDC89Q8N998 374 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 OR6C4Q8NGE1 309 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 GPBAR1Q8TDU6 330 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PLEKHG4BQ96PX9 1271 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 ARFGAP3Q9NP61 516 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 VPS18Q9P253 973 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CNOT6Q9ULM6 557 aaKnown RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CLCA2Q9UQC9 943 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 U3KQA8 63 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 E7EVH7 732 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 BUD23O43709 281 aaKnown RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 USP12O75317 370 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CRTAMO95727 393 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 MT-CO3P00414 261 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 FGGP02679 453 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 AK4P27144 223 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 CXCR5P32302 372 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 SPAM1P38567 509 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 ACTR1BP42025 376 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 GDF10P55107 478 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 ACTR1AP61163 376 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 INSM1Q01101 510 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TARDBPQ13148 414 aaKnown RBP eCLIP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PYCR3Q53H96 274 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PHYKPLQ8IUZ5 450 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 ZDHHC1Q8WTX9 485 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PTCD2Q8WV60 388 aaKnown RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 GLYATL1Q969I3 302 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TTC25Q96NG3 672 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 GORASP1Q9BQQ3 440 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TLR10Q9BXR5 811 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 OR2AG1Q9H205 316 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 RMI1Q9H9A7 625 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TRIM39Q9HCM9 518 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 TAAR2Q9P1P5 351 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 NFKBIL1Q9UBC1 381 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 OAS3Q9Y6K5 1087 aaKnown RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 PPFIA2O75334 1257 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 METTL18O95568 372 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 LPOP22079 712 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 ADRA1AP35348 466 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 PDE1BQ01064 536 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 OLIG2Q13516 323 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 TAF1AQ15573 450 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 FAM151BQ6UXP7 276 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 CHST15Q7LFX5 561 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 GSTA5Q7RTV2 222 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 GATA6Q92908 595 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 SCARF2Q96GP6 870 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 DEPDC7Q96QD5 511 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 CCDC3Q9BQI4 270 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 LRRC40Q9H9A6 602 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 SPATS2LQ9NUQ6 558 aaKnown RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 TRMT1Q9NXH9 659 aaKnown RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 IL17CQ9P0M4 197 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 FEZ2Q9UHY8 353 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-203ENST00000474047 PRKAB1Q9Y478 270 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 JRKLQ9Y4A0 524 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 ARL5AQ9Y689 179 aa14.09□□□□□ -0.15
VAMP4-203ENST00000474047 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 GAS8O95995 478 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 PROS1P07225 676 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 GTF2H3Q13889 308 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 LRP8Q14114 963 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 CCNG2Q16589 344 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 C14orf28Q4W4Y0 310 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 PERM1Q5SV97 790 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 ZNF648Q5T619 568 aaPredicted RBP14.08□□□□□ -0.16
VAMP4-203ENST00000474047 OGFOD3Q6PK18 319 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 BRSK1Q8TDC3 778 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 CCDC74AQ96AQ1 378 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 IL26Q9NPH9 171 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 ATXN10Q9UBB4 475 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 ZKSCAN5Q9Y2L8 839 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
VAMP4-203ENST00000474047 TMEM8BA6NDV4 472 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 TRABD2BA6NFA1 517 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 RHPN2P1A8MT19 583 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ZW10O43264 779 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 GRID2O43424 1007 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 KIF5CO60282 957 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ITGA9Q13797 1035 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 OASLQ15646 514 aaKnown RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 LINC00523Q86TU6 105 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 NRROSQ86YC3 692 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 Q8N9G6 341 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms