RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, human

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-208	ENST00000464001	C1RL	Q9NZP8	487 aa		4.08	□□□□□ -1.76
ITGB1-208	ENST00000464001	PCDHGB4	Q9UN71	923 aa		4.08	□□□□□ -1.76
ITGB1-208	ENST00000464001	hCG_1807616	A0A1W2PRN6	198 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	LILRA5	A6NI73	299 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	TRIM64C	A6NLI5	447 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	KLK8	O60259	260 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	TSPAN3	O60637	253 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	ZG16	O60844	167 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	HMMR	O75330	724 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	GJB3	O75712	270 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	TGDS	O95455	350 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	LDLR	P01130	860 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	APOH	P02749	345 aa	Predicted RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	RNF224	P0DH78	156 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	CDH1	P12830	882 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	ATP6V1E1	P36543	226 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	CTCF	P49711	727 aa	Predicted RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	CLDN2	P57739	230 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	KRTAP10-12	P60413	245 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	SEC61B	P60468	96 aa	Known RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	REL	Q04864	619 aa	Predicted RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	UBE3A	Q05086	875 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	CHRND	Q07001	517 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC12A1	Q13621	1099 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	SCARB2	Q14108	478 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	SERTAD4-AS1	Q5TG53	156 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	ADGRG6	Q86SQ4	1221 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	CIART	Q8N365	385 aa	Predicted RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	ARL6IP6	Q8N6S5	226 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	KCNG4	Q8TDN1	519 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	NOC3L	Q8WTT2	800 aa	Known RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	STAM	Q92783	540 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	SPAG5	Q96R06	1193 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	TWNK	Q96RR1	684 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	GPATCH1	Q9BRR8	931 aa	Known RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	MXD3	Q9BW11	206 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	ABCG4	Q9H172	646 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	KLHL1	Q9NR64	748 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	IL1RAPL1	Q9NZN1	696 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	RCOR1	Q9UKL0	485 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	PA2G4	Q9UQ80	394 aa	Known RBP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	PSAT1	Q9Y617	370 aa		4.07	□□□□□ -1.76
ITGB1-208	ENST00000464001	PDS5A	Q29RF7	1337 aa	Known RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	CAPN9	O14815	690 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	AMBP	P02760	352 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	PRSS1	P07477	247 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ETFA	P13804	333 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ATP6V1B1	P15313	513 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	TIMP3	P35625	211 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	USP8	P40818	1118 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMPO	P42166	694 aa	Known RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ATP12A	P54707	1039 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	RAD23B	P54727	409 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ARF3	P61204	181 aa	Predicted RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	PITX1	P78337	314 aa	Predicted RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ARF1	P84077	181 aa	Known RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	EFR3A	Q14156	821 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	SMC1A	Q14683	1233 aa	Known RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	VEPH1	Q14D04	833 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	RASA2	Q15283	850 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	CTF1	Q16619	201 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	MMEL1	Q495T6	779 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	KCNT1	Q5JUK3	1230 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	SNX30	Q5VWJ9	437 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC22A25	Q6T423	547 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	DSG4	Q86SJ6	1040 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	NFE4	Q86UQ8	179 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	EPHX4	Q8IUS5	362 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	NGEF	Q8N5V2	710 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	CTCFL	Q8NI51	663 aa	Predicted RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	GRAPL	Q8TC17	118 aa	Predicted RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	NSUN4	Q96CB9	384 aa	Known RBP	4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	FBXL8	Q96CD0	374 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	NUF2	Q9BZD4	464 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	ZWILCH	Q9H900	591 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	DIAPH3	Q9NSV4	1193 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	TAAR2	Q9P1P5	351 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	PEMT	Q9UBM1	199 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	RPS6KA6	Q9UK32	745 aa		4.06	□□□□□ -1.76
ITGB1-208	ENST00000464001	HTATSF1	O43719	755 aa	Known RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	BAG2	O95816	211 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	MLYCD	O95822	493 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	MMP2	P08253	660 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	IL11	P20809	199 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	KIF5B	P33176	963 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	CCR9	P51686	369 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	CLCNKA	P51800	687 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	VAMP2	P63027	116 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMF1	P82094	1093 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	PPARD	Q03181	441 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	PTPN14	Q15678	1187 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	KRT24	Q2M2I5	525 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	LCE1F	Q5T754	118 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	TRNP1	Q6NT89	227 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	TAOK1	Q7L7X3	1001 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	KRT74	Q7RTS7	529 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms