RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MTHFRP42898 656 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 AP3M2P53677 418 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TP53BP2Q13625 1128 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 FRG1Q14331 258 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SMN1Q16637 294 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SPANXN3Q5MJ09 141 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 RBM20Q5T481 1227 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 STEAP4Q687X5 459 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF470Q6ECI4 717 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GTF2IRD2BQ6EKJ0 949 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ARHGAP36Q6ZRI8 547 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GTF2IRD2Q86UP8 949 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ATP6V0D2Q8N8Y2 350 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PDPRQ8NCN5 879 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SPATA22Q8NHS9 363 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NCLNQ969V3 563 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PMEPA1Q969W9 287 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MCRS1Q96EZ8 462 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ASIC4Q96FT7 647 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GPR78Q96P69 363 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 QKIQ96PU8 341 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PSD2Q9BQI7 771 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TEX13BQ9BXU2 312 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF717Q9BY31 904 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 COA1Q9GZY4 146 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 RIBC2Q9H4K1 309 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 RNF167Q9H6Y7 350 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 AKTIPQ9H8T0 292 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 HPS4Q9NQG7 708 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TEKT2Q9UIF3 430 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ENPP5Q9UJA9 477 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 DOT1LQ8TEK3 1739 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 C12orf71A8MTZ7 269 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF99A8MXY4 864 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SPATA31C2B4DYI2 1134 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SLCO1B7G3V0H7 640 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 DFFAO00273 331 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PEX10O60683 326 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MITFO75030 526 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SOAT2O75908 522 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NR3C2P08235 984 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 HTR1AP08908 422 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 HGFP14210 728 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ITIH1P19827 911 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GGT5P36269 586 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ARSFP54793 590 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 OR2B6P58173 313 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 OR4D2P58180 307 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 KCNAB2Q13303 367 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PPIL2Q13356 520 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CAPSQ13938 189 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TRIM60Q495X7 471 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NOMO2Q5JPE7 1267 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 C6orf141Q5SZD1 244 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SIGIRRQ6IA17 410 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GLYATQ6IB77 296 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CCSAPQ6IQ19 270 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 UNC5DQ6UXZ4 953 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 OTOP3Q7RTS5 596 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 RBM23Q86U06 439 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 P2RY8Q86VZ1 359 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GOLM1Q8NBJ4 401 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 UBASH3BQ8TF42 649 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 S100ZQ8WXG8 99 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ESAMQ96AP7 390 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MYRFLQ96LU7 910 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF641Q96N77 438 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NTPCRQ9BSD7 190 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 IDI2Q9BXS1 227 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SMOC2Q9H3U7 446 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 DSN1Q9H410 356 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MID1IP1Q9NPA3 183 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CD320Q9NPF0 282 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 INTS7Q9NVH2 962 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ARMC1Q9NVT9 282 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PCDH10Q9P2E7 1040 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MORF4L1Q9UBU8 362 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CNTN6Q9UQ52 1028 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 FNDC3AQ9Y2H6 1198 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ANGPTL3Q9Y5C1 460 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 A0A1W2PQ72 361 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 YDJCA8MPS7 323 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 H0Y626 953 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PMPCBO75439 489 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 HSMCR30P0CW71 290 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NFKB1P19838 968 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 WEE1P30291 646 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 SFNP31947 248 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CYP2C18P33260 490 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MLLT3P42568 568 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MASP1P48740 699 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 FOXA1P55317 472 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CD83Q01151 205 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GRSF1Q12849 480 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CTF1Q16619 201 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ATAD3CQ5T2N8 411 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms