RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RPL4P36578 427 aaKnown RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 C9orf64Q5T6V5 341 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 TMEM139Q8IV31 216 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SCAIQ8N9R8 606 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 ZNF296Q8WUU4 475 aaPredicted RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 IL12RB2Q99665 862 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 WDR55Q9H6Y2 383 aaPredicted RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 AJAP1Q9UKB5 411 aaPredicted RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SCN2BO60939 215 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 IPO13O94829 963 aaKnown RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 DTLQ9NZJ0 730 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 BPGMP07738 259 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 TALDO1P37837 337 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 HSPA7P48741 367 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 CCNYL2Q5T2Q4 361 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 TSTD2Q5T7W7 516 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 FAM180AQ6UWF9 173 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 EIF3MQ7L2H7 374 aaKnown RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 OFCC1Q8IZS5 231 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 LRRC57Q8N9N7 239 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 ITCHQ96J02 903 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 HCRTO43612 131 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SLC28A2O43868 658 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SLC25A12O75746 678 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 PIGRP01833 764 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SLC11A1P49279 550 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 TSNQ15631 228 aaKnown RBP18.49■□□□□ 0.55
CLIP2-202ENST00000361545 FAM129CQ86XR2 697 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 OR52L1Q8NGH7 329 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 HMGB4Q8WW32 186 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SLC9A7Q96T83 725 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 SLC22A3O75751 556 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 LCA5LO95447 670 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 TRBC1P01850 177 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 UNGP13051 313 aaPredicted RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 JAK1P23458 1154 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 STX4Q12846 297 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 INO80DQ53TQ3 878 aaPredicted RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 LRRC74BQ6ZQY2 392 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 NRSN1Q8IZ57 195 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 LCN9Q8WX39 176 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 CNTN3Q9P232 1028 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 CORO2BQ9UQ03 480 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 KRT33AO76009 404 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 GATMP50440 423 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 ALKBH2Q6NS38 261 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 TRIM40Q6P9F5 258 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 SPESP1Q6UW49 350 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 CCDC103Q8IW40 242 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 TPRKBQ9Y3C4 175 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 RHPN2P1A8MT19 583 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 GPR88Q9GZN0 384 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 ITPKBP27987 946 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 CPTPQ5TA50 214 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 TCAIMQ8N3R3 496 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 RP9Q8TA86 221 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 NMD3Q96D46 503 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 REXO5Q96IC2 774 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 BRINP2Q9C0B6 783 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 IPPKQ9H8X2 491 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 PTSQ03393 145 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 INAQ16352 499 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 ZIK1Q3SY52 487 aaPredicted RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 ANXA8L1Q5VT79 327 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 ZNF366Q8N895 744 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 PHF10Q8WUB8 498 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 C12orf65Q9H3J6 166 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 NOL11Q9H8H0 719 aaKnown RBP18.48■□□□□ 0.55
CLIP2-202ENST00000361545 PRKAB1Q9Y478 270 aa18.48■□□□□ 0.55
CLIP2-202ENST00000361545 TK2O00142 265 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 OR6B1O95007 311 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 CHRNA4P43681 627 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 NRIP1P48552 1158 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 UBXN11Q5T124 520 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 DEF8Q6ZN54 512 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 RORBQ92753 470 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 RNF186Q9NXI6 227 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 TULP2O00295 520 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 SNUPNO95149 360 aaKnown RBP18.47■□□□□ 0.55
CLIP2-202ENST00000361545 GDF10P55107 478 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 ENPEPQ07075 957 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 SVOPQ8N4V2 548 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 FAXDC2Q96IV6 333 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 TMEM175Q9BSA9 504 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 TRMOQ9BU70 441 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 CEP44Q9C0F1 390 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 ZNF446Q9NWS9 450 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 M0R2N6 131 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 AP3D1O14617 1153 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 TSPAN19P0C672 248 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 CCNYL3P0C7X3 344 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 DGKEP52429 567 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 ALG11Q2TAA5 492 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 ADGRF1Q5T601 910 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 OR8H2Q8N162 312 aa18.47■□□□□ 0.55
CLIP2-202ENST00000361545 SIDT2Q8NBJ9 832 aaKnown RBP18.47■□□□□ 0.55
CLIP2-202ENST00000361545 TTYH3Q9C0H2 523 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms