RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ptpn3A2ALK8 913 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ssxb6A2BI74 170 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Skint3A7TZF0 458 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm5798F7BTS7 198 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm8050L7N2E3 205 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 CyctP00015 105 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 FesP16879 822 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 SgcgP82348 291 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ap2m1P84091 435 aaKnown RBP9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 StradaQ3UUJ4 431 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 StyxQ60969 223 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 MslnQ61468 625 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cdc14aQ6GQT0 603 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fastkd5Q7TMV3 762 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 NanogQ80Z64 305 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Kdm1bQ8CIG3 826 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ago1Q8CJG1 857 aaKnown RBP9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mterf3Q8R3J4 412 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Unc93b1Q8VCW4 598 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr853Q8VGG6 305 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pcdhga11Q91XY8 933 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Wdr55Q9CX97 388 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 PacrglQ9D3X5 248 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gabra4Q9D6F4 552 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Haus5Q9D786 619 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Slc6a21A0A1B0GSD2 748 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm2022A0A1Y7VLT7 144 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gpr137cE9Q343 423 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpine3E9Q6A2 401 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fzd1O70421 642 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Plekhf1Q3TB82 279 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cyp2j13Q3UNV4 503 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Med22Q62276 200 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cspg5Q71M36 566 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc41a1Q8BJA2 512 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gpat3Q8C0N2 438 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Q8CCC3 530 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Plac9Q8K262 108 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cpt1bQ924X2 772 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Yipf2Q99LP8 312 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snx10Q9CWT3 201 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Spesp1Q9D5A0 399 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mbd3l1Q9D9H3 186 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kiaa0141Q9DCV6 510 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znf207Q9JMD0 495 aaKnown RBP9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Acot2Q9QYR9 453 aa9.15□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Iqsec2Q5DU25 1478 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zmynd12A2BGJ5 363 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3383J3QQ59 259 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3239L7N2D9 227 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ulk1O70405 1051 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kcnn4O89109 425 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TP20293 436 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cdh8P97291 799 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zmat1Q3V0C1 714 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpinb9dQ8BMT0 377 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ift80Q8K057 777 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Stk32cQ8QZV4 488 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr697Q8VFM4 317 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr1487Q8VFQ6 315 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Prdm5Q9CXE0 599 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem114Q9D563 222 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Med8Q9D7W5 268 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kctd4Q9D7X1 259 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 IgtpQ9DCE9 423 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 AnkhQ9JHZ2 492 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dpy19l4A2AJQ3 722 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fkbp7O54998 218 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmprss11eQ5S248 423 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MogQ61885 246 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hmgb4Q6P8W9 181 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Adam29Q811Q4 763 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Wasf2Q8BH43 497 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fbxl4Q8BH70 621 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pik3cbQ8BTI9 1064 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rdh12Q8BYK4 316 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tprg1Q8CB49 279 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ipo13Q8K0C1 963 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snapc5Q8R2K7 98 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MpstQ99J99 297 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Klhl22Q99JN2 634 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 March2Q99M02 246 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 NenfQ9CQ45 171 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dppa5aQ9CQS7 118 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Atg12Q9CQY1 141 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Prl8a6Q9DAY2 240 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 SrpraQ9DBG7 636 aaKnown RBP9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dgcr6O35347 198 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 DhfrP00375 187 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PlaaP27612 794 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 QrfprP83861 433 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Eri2Q5BKS4 688 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 CcncQ62447 283 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr17Q7TRM9 315 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem220Q8BP07 167 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pabpc5Q8C7D3 381 aaKnown RBP9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Acad10Q8K370 1069 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 FlcnQ8QZS3 579 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 HnrnpabQ99020 285 aaKnown RBP9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TympQ99N42 471 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms