RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 B4GALT5O43286 388 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 NOS1APO75052 506 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 GABBR2O75899 941 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 CYP4F8P98187 520 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC18A2Q05940 514 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 TEX44Q53QW1 395 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ATAD3BQ5T9A4 648 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 PTCHD4Q6ZW05 846 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ADAM7Q9H2U9 754 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLIT3O75094 1523 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 GCATO75600 419 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 AQP1P29972 269 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 GRIA1P42261 906 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 PIK3CGP48736 1102 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 RAB25P57735 213 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 OR2B6P58173 313 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 IRF8Q02556 426 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SCN1BQ07699 218 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 CCNIQ14094 377 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 AP5B1Q2VPB7 878 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 HECTD2Q5U5R9 776 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 TMEM53Q6P2H8 277 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC26A9Q7LBE3 791 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SPATA19Q7Z5L4 167 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC22A16Q86VW1 577 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 KLHL28Q9NXS3 571 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 TNFSF13BQ9Y275 285 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 HES2Q9Y543 173 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ST14Q9Y5Y6 855 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 MAGEB3O15480 346 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 TOP3BO95985 862 aaKnown RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 CYP2A7P20853 494 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 IRF9Q00978 393 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 LDB1Q86U70 411 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ARMC8Q8IUR7 673 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 C10orf53Q8N6V4 93 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZFP28Q8NHY6 868 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 AP3S1Q92572 193 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 PRR11Q96HE9 360 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SERPINB11Q96P15 392 aa12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 GFM1Q96RP9 751 aaKnown RBP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 SF3B1O75533 1304 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSPG4P13-202ENST00000567704 ELOVL7A1L3X0 281 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 LYPLA2O95372 231 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 CLIC3O95833 236 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 NOS3P29474 1203 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 TLR1Q15399 786 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 OVOS1Q6IE37 1185 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 MACC1Q6ZN28 852 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 PCDH19Q8TAB3 1148 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 LRRC15Q8TF66 581 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 RNF38Q9H0F5 515 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 FAM198AQ9UFP1 575 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 CCDC162PA2VCL2 907 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 FBP2O00757 339 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 RECQL4O94761 1208 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 OTCP00480 354 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 NR2F6P10588 404 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 IFI30P13284 250 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 ACLYP53396 1101 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 ATP6V0D1P61421 351 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 HERC3Q15034 1050 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 NEMP2A6NFY4 417 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 A8MX80 341 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 EFCAB9A8MZ26 197 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 PRRG1O14668 218 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 SUV39H1O43463 412 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 DHFRP00374 187 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 TYMPP19971 482 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 TUFMP49411 452 aaKnown RBP12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF567Q8N184 647 aa12.37□□□□□ -0.43
CSPG4P13-202ENST00000567704 LRRC20Q8TCA0 184 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms