RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 PAK4O96013 591 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RAB3AP20336 220 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PRKACBP22694 351 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ITGA6P23229 1130 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CIAPIN1Q6FI81 312 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 OTUD7BQ6GQQ9 843 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ARHGAP36Q6ZRI8 547 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MTSS1LQ765P7 747 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ADGRD2Q7Z7M1 963 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RBM15BQ8NDT2 890 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SIMC1Q8NDZ2 872 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 EXT2Q93063 718 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ARL11Q969Q4 196 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PANX3Q96QZ0 392 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TBCDQ9BTW9 1192 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MRPL9Q9BYD2 267 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 USP29Q9HBJ7 922 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 WWOXQ9NZC7 414 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CRYL1Q9Y2S2 319 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MAU2Q9Y6X3 613 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 H0YAE9 185 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PKLRP30613 574 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ALDH3B2P48448 385 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NR6A1Q15406 480 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 GDPD1Q8N9F7 314 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PHF24Q9UPV7 400 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 KCNH4Q9UQ05 1017 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PCDHGB5Q9Y5G0 923 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HIST1H2ABP04908 130 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HOXD12P35452 270 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TCF7P36402 384 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 GABARAPL2P60520 117 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SYDE2Q5VT97 1194 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FAM180AQ6UWF9 173 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HIST3H2AQ7L7L0 130 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 REXO1L1PQ8IX06 675 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HIST1H2ACQ93077 130 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF350Q9GZX5 532 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DPAGT1Q9H3H5 408 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ELAC1Q9H777 363 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 C8orf33Q9H7E9 229 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 XPNPEP1Q9NQW7 623 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DNAJC28Q9NX36 388 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FBXO21O94952 628 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 IFNA2P01563 188 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HOXD8P13378 290 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PRKCAP17252 672 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PGAM1P18669 254 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FSHRP23945 695 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 GTF2E2P29084 291 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 GKP32189 559 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CHKAP35790 457 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MCCD1P59942 119 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SH3D19Q5HYK7 790 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 KBTBD6Q86V97 674 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CENPOQ9BU64 300 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TAS2R9Q9NYW1 312 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SLC39A10Q9ULF5 831 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CHD1O14646 1710 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NEURL1BA8MQ27 555 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 B3GALNT1O75752 331 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PSKH1P11801 424 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CES1P23141 567 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CYP2C18P33260 490 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TWF1Q12792 350 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FAXCQ5TGI0 409 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DPP8Q6V1X1 898 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ADGRG6Q86SQ4 1221 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 LAPTM4BQ86VI4 370 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 BEST4Q8NFU0 473 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 POC1BQ8TC44 478 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FBXO25Q8TCJ0 367 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RUSC1Q9BVN2 902 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HSPB11Q9Y547 144 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CDH10Q9Y6N8 788 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 AGAP14A8MT82 685 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DLGAP1O14490 977 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NR2C1P13056 603 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DRD4P21917 467 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 IDH2P48735 452 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CD97P48960 835 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SLC5A3P53794 718 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 EIF4A1P60842 406 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CDH17Q12864 832 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 AIMP2Q13155 320 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 AUHQ13825 339 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF169Q14929 603 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 IQSEC1Q6DN90 963 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SPATA19Q7Z5L4 167 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NT5DC4Q86YG4 428 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 C1orf54Q8WWF1 131 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MARK4Q96L34 752 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PCDHGC3Q9UN70 934 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RPH3AQ9Y2J0 694 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 A0A1W2PP64 1363 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 PAPSS1O43252 624 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HSPA12AO43301 675 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms