RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 FIBCD1Q8N539 461 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SEMA6AQ9H2E6 1030 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 CAAP1Q9H8G2 361 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 YIPF1Q9Y548 306 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 PLXNA3P51805 1871 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 RAMP2O60895 175 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 IGLV3-27P01718 113 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 URODP06132 367 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 NMBRP28336 390 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 SLC6A4P31645 630 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 GJA8P48165 433 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CPSF7Q8N684 471 aaKnown RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CROCCQ5TZA2 2017 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 PLOD2O00469 737 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TIMP1P01033 207 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 JUNP05412 331 aaKnown RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TACR2P21452 398 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CDH15P55291 814 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CTBSQ01459 385 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TWF1Q12792 350 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 HERC3Q15034 1050 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 DLG2Q15700 870 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 HECTD3Q5T447 861 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 CLEC14AQ86T13 490 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF689Q96CS4 500 aaPredicted RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 TMA16Q96EY4 203 aaKnown RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 FCRL5Q96RD9 977 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 RBBP8Q99708 897 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 NPAS2Q99743 824 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 NUF2Q9BZD4 464 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 C20orf96Q9NUD7 363 aaPredicted RBP13.11□□□□□ -0.31
PLOD3-201ENST00000223127 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 MYRFQ9Y2G1 1151 aa13.11□□□□□ -0.31
PLOD3-201ENST00000223127 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ZCWPW2A0A1B0GU75 182 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 F5H5T6 163 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 SLC22A2O15244 555 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 HDAC3O15379 428 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 GRID2O43424 1007 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TRIM13O60858 407 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 GJB3O75712 270 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ANXA9O76027 345 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 C8BP07358 591 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
PLOD3-201ENST00000223127 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ANO4Q32M45 955 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ANKDD1AQ495B1 522 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 MARC1Q5VT66 337 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 SEL1L3Q68CR1 1132 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM135Q86UB9 458 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 MYO1HQ8N1T3 1032 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 LRTOMTQ8WZ04 291 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
PLOD3-201ENST00000223127 CPNE1Q99829 537 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 IL22Q9GZX6 179 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 CAB39LQ9H9S4 337 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ZBTB26Q9HCK0 441 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 INIPQ9NRY2 104 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 PNPLA3Q9NST1 481 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TRPM5Q9NZQ8 1165 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ACTL7AQ9Y615 435 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 IGLV3-10A0A075B6K4 115 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 A0A0D9SEW6 157 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 WASH4PA8MWX3 477 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 H0YJX3 145 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TRIM38O00635 465 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TSPAN3O60637 253 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ABLIM3O94929 683 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 PEX11BO96011 259 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 LIMK2P53671 638 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 PFKPQ01813 784 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RING1Q06587 406 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 ILKAPQ9H0C8 392 aaPredicted RBP13.1□□□□□ -0.31
PLOD3-201ENST00000223127 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 RAP2CQ9Y3L5 183 aa13.1□□□□□ -0.31
PLOD3-201ENST00000223127 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
PLOD3-201ENST00000223127 A0A096LPK6 155 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms