RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Cyp2b19O55071 492 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 CremP27699 357 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ythdf1P59326 559 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 P4ha3Q6W3F0 542 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Hectd2Q8CDU6 774 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Bloc1s5Q8R015 185 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Smg8Q8VE18 991 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mad2l1Q9Z1B5 205 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Iqsec2Q5DU25 1478 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 KantrA0A1W2P7I0 76 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm5751A2AHC8 147 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Scgb2b19J3QM75 112 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Clcn7O70496 803 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tango2P54797 276 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rplp2P99027 115 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rgl2Q61193 778 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nfe2l1Q61985 741 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Plekha1Q8BUL6 383 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 RergQ8R367 199 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 TesminQ9WTJ6 475 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Scgb2b12S4R2L0 112 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Olfr1200A2ATJ4 336 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Slfn8B1ARD8 910 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 CkmP07310 381 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nckap1P28660 1128 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Zfp868Q3UTQ6 422 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Klra2Q60660 288 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Arhgap11aQ80Y19 987 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mcoln3Q8R4F0 553 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pacsin3Q99JB8 424 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Krtap5-3Q9D226 196 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Il1rnP25085 178 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rpusd2Q149F1 553 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nat8lQ3UGX3 299 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fbxo10Q7TQF2 950 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Znf423Q80TS5 1292 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mettl21cQ8BLU2 248 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 D630039A03RikQ8K0M7 236 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cir1Q9DA19 450 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm13089A2AGW7 455 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Vmn2r55G3UWZ4 781 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Grip2G3XA20 1042 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Vmn2r53L7N473 806 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Stat5aP42230 793 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fbxo40P62932 710 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Msx2Q03358 267 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Q3U4G0 281 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Bcl2l1Q64373 233 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ppm1lQ8BHN0 360 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 RfkQ8CFV9 155 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cyp4f3Q99N16 524 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gpr137cE9Q343 423 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 S100a2J3QMC7 104 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Il13ra2O88786 383 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Anxa6P14824 673 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Dok6Q2MHE5 331 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fscn1Q61553 493 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 MogsQ80UM7 834 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Slc9a4Q8BUE1 797 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cndp2Q9D1A2 475 aaKnown RBP13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 JhyE9Q793 770 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ikzf2P81183 526 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ddr1Q03146 911 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Prom2Q3UUY6 835 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lcp2Q60787 533 aaKnown RBP13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 XiapQ60989 496 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Arnt2Q61324 712 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Snapc2Q91XA5 359 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tmem86aQ9D8N3 241 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 PllpQ9DCU2 182 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Il22bQ9JJY8 179 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cyp2g1Q9WV19 494 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Myo5bP21271 1818 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 NinQ61043 2035 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tpst2O88856 376 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Csf2P01587 141 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 JchainP01592 159 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mup3P04939 184 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Clcn3P51791 818 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cntn3Q07409 1028 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gpr151Q7TSN6 422 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Prl7b1Q8CGZ9 251 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Olfr1487Q8VFQ6 315 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ankra2Q99PE2 312 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 MsraQ9D6Y7 233 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Slco1a1Q9QXZ6 670 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Itgb6Q9Z0T9 787 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Znfx1Q8R151 1909 aaKnown RBP13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Xlr4aA2BI40 215 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mfsd8Q8BH31 519 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 DseQ8BLI4 958 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rap2cQ8BU31 183 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Usp17ldG5E8G2 545 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Usp17lcG5E8I7 545 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 NrlP54846 237 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 SgcgP82348 291 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ugt1a9Q62452 528 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Slitrk4Q810B8 837 aa13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rbm34Q8C5L7 375 aaKnown RBP13.94□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Thap1Q8CHW1 210 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms