RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ANKRD6Q9Y2G4 727 aa15.11■□□□□ 0.01
CD9-210ENST00000543916 SPO11Q9Y5K1 396 aa15.11■□□□□ 0.01
CD9-210ENST00000543916 C1orf232A0A0U1RR37 186 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 A6NNZ2 444 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PSMD11O00231 422 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 ARHGAP33O14559 1287 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 FPGTO14772 594 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PHF2O75151 1096 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 USP12O75317 370 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 ZNF30P17039 623 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 HLA-DPA1P20036 260 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 CASQ1P31415 396 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 RPL22P35268 128 aaKnown RBP15.1■□□□□ 0.01
CD9-210ENST00000543916 COILP38432 576 aaPredicted RBP15.1■□□□□ 0.01
CD9-210ENST00000543916 ETV3P41162 512 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 STC1P52823 247 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PTSQ03393 145 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 SPARCL1Q14515 664 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 LRRC14Q15048 493 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 AASDHQ4L235 1098 aaPredicted RBP15.1■□□□□ 0.01
CD9-210ENST00000543916 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 RANBP10Q6VN20 620 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 KYAT3Q6YP21 454 aaKnown RBP15.1■□□□□ 0.01
CD9-210ENST00000543916 Q6ZVL8 140 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 GSTA5Q7RTV2 222 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 LYSMD3Q7Z3D4 306 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 IQCHQ86VS3 1027 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PELI3Q8N2H9 469 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 CCDC89Q8N998 374 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PLA2G15Q8NCC3 412 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 OR2I1PQ8NGU4 316 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 DTD2Q96FN9 168 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PPP1R2P1Q96PQ5 205 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 EDEM2Q9BV94 578 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 MAGEE1Q9HCI5 957 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 PAK5Q9P286 719 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 ZNF711Q9Y462 761 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 SNX11Q9Y5W9 270 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 HS3ST3A1Q9Y663 406 aa15.1■□□□□ 0.01
CD9-210ENST00000543916 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 TLR4O00206 839 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 PDE2AO00408 941 aaPredicted RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 PCCBP05166 539 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 FGF1P05230 155 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 THEGLP0DJG4 465 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 CTSKP43235 329 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 C21orf59P57076 290 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 NXPH1P58417 271 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 PFN3P60673 137 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 DENND5AQ6IQ26 1287 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 CCDC137Q6PK04 289 aaKnown RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 TECPR1Q7Z6L1 1165 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 SPATS2Q86XZ4 545 aaKnown RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 PDCD7Q8N8D1 485 aaKnown RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 ATL2Q8NHH9 583 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 EID2BQ96D98 161 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 NUS1Q96E22 293 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 KLHDC7BQ96G42 594 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 TBL1YQ9BQ87 522 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 GTPBP2Q9BX10 602 aaKnown RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 ETNK1Q9HBU6 452 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 GPR27Q9NS67 375 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 SHOC2Q9UQ13 582 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 ZNF106Q9H2Y7 1883 aaKnown RBP15.09■□□□□ 0.01
CD9-210ENST00000543916 GON4LQ3T8J9 2241 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 BPTFQ12830 3046 aa15.09■□□□□ 0.01
CD9-210ENST00000543916 LRP4O75096 1905 aa15.08■□□□□ 0
CD9-210ENST00000543916 K7ESM1 405 aa15.08■□□□□ 0
CD9-210ENST00000543916 CDX4O14627 284 aaPredicted RBP15.08■□□□□ 0
CD9-210ENST00000543916 AURKAO14965 403 aa15.08■□□□□ 0
CD9-210ENST00000543916 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0
CD9-210ENST00000543916 AP2A1O95782 977 aa15.08■□□□□ 0
CD9-210ENST00000543916 SLC4A1P02730 911 aa15.08■□□□□ 0
CD9-210ENST00000543916 SYPP08247 313 aa15.08■□□□□ 0
CD9-210ENST00000543916 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
CD9-210ENST00000543916 ACTN2P35609 894 aa15.08■□□□□ 0
CD9-210ENST00000543916 FDFT1P37268 417 aa15.08■□□□□ 0
CD9-210ENST00000543916 OVGP1Q12889 678 aa15.08■□□□□ 0
CD9-210ENST00000543916 SEMA5AQ13591 1074 aa15.08■□□□□ 0
CD9-210ENST00000543916 TRIP13Q15645 432 aaPredicted RBP15.08■□□□□ 0
CD9-210ENST00000543916 TPRG1LQ5T0D9 272 aa15.08■□□□□ 0
CD9-210ENST00000543916 Q6ZSR6 202 aa15.08■□□□□ 0
CD9-210ENST00000543916 SLC22A18ASQ8N1D0 253 aa15.08■□□□□ 0
CD9-210ENST00000543916 MINDY1Q8N5J2 469 aa15.08■□□□□ 0
CD9-210ENST00000543916 ZDHHC5Q9C0B5 715 aa15.08■□□□□ 0
CD9-210ENST00000543916 LRRC40Q9H9A6 602 aa15.08■□□□□ 0
CD9-210ENST00000543916 IL21RQ9HBE5 538 aa15.08■□□□□ 0
CD9-210ENST00000543916 RAB6BQ9NRW1 208 aa15.08■□□□□ 0
CD9-210ENST00000543916 CD84Q9UIB8 345 aa15.08■□□□□ 0
CD9-210ENST00000543916 CACNA1EQ15878 2313 aa15.08■□□□□ 0
CD9-210ENST00000543916 GOLGA6CA6NDK9 693 aa15.07■□□□□ 0
CD9-210ENST00000543916 GOLGA6BA6NDN3 693 aa15.07■□□□□ 0
CD9-210ENST00000543916 GOLGA6DP0CG33 693 aa15.07■□□□□ 0
CD9-210ENST00000543916 RABIFP47224 123 aa15.07■□□□□ 0
CD9-210ENST00000543916 FNTAP49354 379 aa15.07■□□□□ 0
CD9-210ENST00000543916 LMNB2Q03252 620 aa15.07■□□□□ 0
CD9-210ENST00000543916 MTM1Q13496 603 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms