RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Ubr1O70481 1757 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Wnk3Q80XP9 1757 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Rasgef1aA0A0N4SVR5 498 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Gm4175D3YTW8 314 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Gm38392E9Q2A2 434 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Vmn2r91E9Q2U5 856 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Ascl5M0QWB7 188 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Cacna2d1O08532 1103 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Tuft1O08970 390 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Cpsf2O35218 782 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 H2-EaP01904 255 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Hoxc9P09633 260 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Gfpt1P47856 697 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Clcn3P51791 818 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Fermt1P59113 677 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Cdh8P97291 799 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Adra1bP97717 514 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Glycam1Q02596 151 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Sdr16c6Q05A13 316 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Znf800Q0VEE6 662 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Plekha7Q3UIL6 1118 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Garnl3Q3V0G7 1038 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Taar6Q5QD13 345 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Prpf4bQ61136 1007 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Olfr1031Q7TR87 336 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Cdadc1Q8BMD5 523 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Cc2d1bQ8BRN9 848 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Rps6kb1Q8BSK8 525 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 PcgF3Q8BTQ0 241 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 RhbgQ8BUX5 455 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Pgm5Q8BZF8 567 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Q8C1R3 189 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Med19Q8C1S0 244 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Hspa12aQ8K0U4 675 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Foxe1Q8R2I0 371 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Olfr1325Q8VF43 315 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Olfr54Q8VFE6 313 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Akr1c21Q91WR5 323 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Lactb2Q99KR3 288 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Atxn3Q9CVD2 355 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 VasnQ9CZT5 673 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Drap1Q9D6N5 205 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Rexo2Q9D8S4 237 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 GatmQ9D964 423 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 SrpraQ9DBG7 636 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Arr3Q9EQP6 381 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Arhgef7Q9ES28 862 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Egfl6Q9JJZ5 550 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Qtrt1Q9JMA2 403 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Krt17Q9QWL7 433 aa4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 IkQ9Z1M8 557 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Sipa1l2Q80TE4 1722 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trav13d-1A0A075B606 110 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trav13-4-dv7A0A075B6C2 110 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trav13n-1A0A0G2JEU8 110 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trav13d-4A0A0G2JFX3 110 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Lcmt1A0A0U1RNF2 332 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Scgb1b24B1B0N6 92 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Pgbd5D3YZI9 523 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trim12cD3Z3L3 497 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Vmn2r59E9PUT5 865 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Trim5E9PV98 497 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Olfr1410E9PYK6 323 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Gm5819E9PZ96 154 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Vmn2r94E9PZK8 818 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Serpinb8O08800 374 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Btnl2O70355 454 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 ChgbP16014 677 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Tacr3P47937 452 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Efna1P52793 205 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Serpinf1P97298 417 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 MplQ08351 625 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 MitfQ08874 526 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Mthfd1lQ3V3R1 977 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Grhl3Q5FWH3 603 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Fam189bQ5HZJ5 669 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Nsrp1Q5NCR9 542 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Htr1dQ61224 374 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Snrnp70Q62376 448 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Enpp3Q6DYE8 874 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Msantd2Q6NZR2 559 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Fgd5Q80UZ0 1219 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Fam98bQ80VD1 429 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Ublcp1Q8BGR9 318 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Wdr35Q8BND3 1181 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Lcmt2Q8BYR1 686 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Ccdc60Q8C4J0 545 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 4933402N03RikQ8CDT9 329 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Mill1Q8HWE7 395 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Acat1Q8QZT1 424 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Sbk1Q8QZX0 417 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Polr3glQ8R0C0 218 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Gpn1Q8VCE2 372 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 ZgpatQ8VDM1 511 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Rab3il1Q8VDV3 383 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Olfr732Q8VFT5 308 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Tubb6Q922F4 447 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Slco1a6Q99J94 670 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Zmynd10Q99ML0 440 aa4.22□□□□□ -1.73
Hmgb1-ps2-201ENSMUST00000117548 Rab27bQ99P58 218 aa4.22□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms