Protein–RNA interactions for Protein: Q8CDT9

4933402N03Rik, MCG1612, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933402N03RikQ8CDT9 Gm25239-201ENSMUST00000174915 86 ntBASIC32.15■■■□□ 2.74
4933402N03RikQ8CDT9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
4933402N03RikQ8CDT9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
4933402N03RikQ8CDT9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
4933402N03RikQ8CDT9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
4933402N03RikQ8CDT9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
4933402N03RikQ8CDT9 Gm15042-201ENSMUST00000120212 883 ntBASIC28.63■■■□□ 2.17
4933402N03RikQ8CDT9 Psd-208ENSMUST00000224556 2034 ntBASIC28.52■■■□□ 2.16
4933402N03RikQ8CDT9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
4933402N03RikQ8CDT9 Gm15045-201ENSMUST00000117359 883 ntBASIC28.07■■■□□ 2.08
4933402N03RikQ8CDT9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
4933402N03RikQ8CDT9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.74■■■□□ 2.03
4933402N03RikQ8CDT9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
4933402N03RikQ8CDT9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
4933402N03RikQ8CDT9 Gm24109-201ENSMUST00000175489 103 ntBASIC27.61■■■□□ 2.01
4933402N03RikQ8CDT9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
4933402N03RikQ8CDT9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
4933402N03RikQ8CDT9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
4933402N03RikQ8CDT9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
4933402N03RikQ8CDT9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
4933402N03RikQ8CDT9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
4933402N03RikQ8CDT9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
4933402N03RikQ8CDT9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
4933402N03RikQ8CDT9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
4933402N03RikQ8CDT9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
4933402N03RikQ8CDT9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
4933402N03RikQ8CDT9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.92■■□□□ 1.9
4933402N03RikQ8CDT9 Gm23366-201ENSMUST00000175022 89 ntBASIC26.9■■□□□ 1.9
4933402N03RikQ8CDT9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
4933402N03RikQ8CDT9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
4933402N03RikQ8CDT9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
4933402N03RikQ8CDT9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
4933402N03RikQ8CDT9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
4933402N03RikQ8CDT9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.69■■□□□ 1.86
4933402N03RikQ8CDT9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
4933402N03RikQ8CDT9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
4933402N03RikQ8CDT9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
4933402N03RikQ8CDT9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
4933402N03RikQ8CDT9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
4933402N03RikQ8CDT9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
4933402N03RikQ8CDT9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.32■■□□□ 1.8
4933402N03RikQ8CDT9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
4933402N03RikQ8CDT9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.18■■□□□ 1.78
4933402N03RikQ8CDT9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.17■■□□□ 1.78
4933402N03RikQ8CDT9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
4933402N03RikQ8CDT9 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.07■■□□□ 1.76
4933402N03RikQ8CDT9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
4933402N03RikQ8CDT9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
4933402N03RikQ8CDT9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
4933402N03RikQ8CDT9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26■■□□□ 1.75
4933402N03RikQ8CDT9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
4933402N03RikQ8CDT9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
4933402N03RikQ8CDT9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.61■■□□□ 1.69
4933402N03RikQ8CDT9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
4933402N03RikQ8CDT9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
4933402N03RikQ8CDT9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
4933402N03RikQ8CDT9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.55■■□□□ 1.68
4933402N03RikQ8CDT9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.52■■□□□ 1.68
4933402N03RikQ8CDT9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
4933402N03RikQ8CDT9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
4933402N03RikQ8CDT9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
4933402N03RikQ8CDT9 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.4■■□□□ 1.66
4933402N03RikQ8CDT9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
4933402N03RikQ8CDT9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
4933402N03RikQ8CDT9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
4933402N03RikQ8CDT9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
4933402N03RikQ8CDT9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
4933402N03RikQ8CDT9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
4933402N03RikQ8CDT9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
4933402N03RikQ8CDT9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.22■■□□□ 1.63
4933402N03RikQ8CDT9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
4933402N03RikQ8CDT9 Gm25238-201ENSMUST00000174914 89 ntBASIC25.2■■□□□ 1.62
4933402N03RikQ8CDT9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
4933402N03RikQ8CDT9 Gm27325-201ENSMUST00000175467 74 ntBASIC25.15■■□□□ 1.62
4933402N03RikQ8CDT9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
4933402N03RikQ8CDT9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
4933402N03RikQ8CDT9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
4933402N03RikQ8CDT9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
4933402N03RikQ8CDT9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.07■■□□□ 1.6
4933402N03RikQ8CDT9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
4933402N03RikQ8CDT9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
4933402N03RikQ8CDT9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
4933402N03RikQ8CDT9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
4933402N03RikQ8CDT9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
4933402N03RikQ8CDT9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
4933402N03RikQ8CDT9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.94■■□□□ 1.58
4933402N03RikQ8CDT9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
4933402N03RikQ8CDT9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
4933402N03RikQ8CDT9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
4933402N03RikQ8CDT9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
4933402N03RikQ8CDT9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
4933402N03RikQ8CDT9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
4933402N03RikQ8CDT9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
4933402N03RikQ8CDT9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
4933402N03RikQ8CDT9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
4933402N03RikQ8CDT9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
4933402N03RikQ8CDT9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
4933402N03RikQ8CDT9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
4933402N03RikQ8CDT9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
4933402N03RikQ8CDT9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms